Multilocus genotyping (MLGs)
Prevalence and multilocus genotyping of Giardia duodenalis in pigs of Shaanxi Province, northwestern China
... and MLGs of ...E MLGs were ...duodenalis MLGs in ...of multilocus genotyping for unraveling the intricate molecular epidemiology of giardiasis in animals and impact on livestock ...
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Occurrence and multilocus genotyping of Giardia duodenalis in black boned sheep and goats in southwestern China
... potential. Multilocus genotyping at bg, tpi and gdh loci formed 14 novel assemblage E MLGs in black- boned sheep and four novel MLGs (three assemblage E MLGs and one assemblage A MLG) ...
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Prevalence and multilocus genotyping of Giardia duodenalis in dairy calves in Xinjiang, Northwestern China
... sample. Multilocus genotyping yielded 15 multilocus genotypes (MLGs), one new assemblage A MLG, and 14 assemblage E ...E MLGs identified here differed genetically from those of cattle ...
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Multilocus genotyping reveals high heterogeneity and strong local population structure of the Plasmodium vivax population in the Peruvian Amazon
... Despite its importance, little information is available on P. vivax epidemiology, e.g. risk factors for infection, transmission dynamics and relapse rate, drug resistance and parasite population structure. Analysing the ...
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Occurrence and multilocus genotyping of Giardia intestinalis assemblage C and D in farmed raccoon dogs, Nyctereutes procyonoides, in China
... detected as mixed infections. In order to estimate the real state of G. intestinalis infections and determine whether mixed infections exist in the raccoon dogs ex- amined here, we applied multilocus ...
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First identification and multilocus genotyping of Giardia duodenalis in pet chipmunks (Eutamias asiaticus) in Sichuan Province, southwestern China
... the multilocus genotype (MLG) model has been widely used to better understand the charac- teristics of ...A MLGs and three different assemblage G MLGs (Table ...
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Multilocus Genotyping Identifies Infections by Multiple Strains of Trichophyton tonsurans
... Each of the PCRs detailed above was performed in a total volume of 8 l with RedJumpStart Taq polymerase (Sigma-Aldrich) and 3.75% dimethyl sulfoxide according to the manufacturer’s recommendations. Annealing ...
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Multilocus Genotyping of Giardial Assemblages associated with Diarrhea in Children and Adults in South India.
... with genotyping of isolates from different parts of the world have shown varying distribution of the human associated genotypes, and generally a particular genotype is found to predominate in a particular area ...
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Prevalence, risk factors and multilocus genotyping of Enterocytozoon bieneusi in farmed foxes (Vulpes lagopus), Northern China
... Results: Of 302 fecal samples from farmed foxes, 37 (12.25 %, 95 % CI 8.55 – 15.95) were PCR-positive for E. bieneusi, and the prevalence was highly associated with the farming mode in that foxes raised outdoors (26.03 % ...
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Development of a framework for genotyping bovine derived Cryptosporidium parvum, using a multilocus fragment typing tool
... Markers were selected as they had shown promising results in other studies of bovine C. parvum [12, 22, 26], and were also ranked highly in a recent review of pub- lished multilocus genotyping methods [15]. ...
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Multilocus Microsatellite Genotyping Array for Investigation of Genetic Epidemiology of Pneumocystis jirovecii
... used multilocus genotyping schemes have revealed that (i) specific ...current multilocus genotyping strategies have left many questions regarding transmission of ...discriminating ...
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Clostridium botulinum Group I Strain Genotyping by 15 Locus Multilocus Variable Number Tandem Repeat Analysis
... Clostridium botulinum is a taxonomic designation that encompasses a broad variety of spore-forming, Gram-positive bacteria producing the botulinum neurotoxin (BoNT). C. botulinum is the etiologic agent of botulism, a ...
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Performance of 6 HCV genotyping 9G test for HCV genotyping in clinical samples
... Currently, various nucleic acid tests such real-time PCR [11, 12], restriction fragment length polymorphism [13], heteroduplex mobility analysis [14], and line-probe assay [15] are used to detect HCV genotypes in plasma ...
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Microsatellite analysis supports clonal propagation and reduced divergence of Trypanosoma vivax from asymptomatic to fatally infected livestock in South America compared to West Africa
... of MLGs found was 25, consisting of 11 MLGs in 47 SA samples (MLGs 1–11) and 12 MLGs in 12 WA samples (MLGs ...the MLGs generally differed at only one MST locus, and many samples ...
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Multilocus Sequence Typing of the Porcine and Human Gastric Pathogen Helicobacter suis
... pylori multilocus sequence typing (atpA, efp, mutY, ppa, trpC, ureI, and yphC) were initially selected for the design of a multilocus sequence typing method for Helicobacter ...
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Comparative Genotyping of Campylobacter jejuni by Amplified Fragment Length Polymorphism, Multilocus Sequence Typing, and Short Repeat Sequencing: Strain Diversity, Host Range, and Recombination
... to genotyping by pulsed-field gel electrophore- sis and many ...molecular genotyping meth- ods may solve some of these ...36), multilocus sequence typing (MLST) (6, 12, 32), and sequence analysis of ...
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Minimum Information about a Genotyping Experiment (MIGEN)
... The first version of MIGen can be found on the MIGen website [7]. Like other MIBBI standards, we emphasize that MIGen specifies the minimum information that needs to be reported, but not the order or format of how the ...
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Adipophilin and perilipin 3 correlate with total lipid content in human breast milk
... The detection of ADRP in breast milk began with its identification in human, bovine and rat MLGs as a major component of the globule surface membrane [22]. Later, ADRP was colocalized with xanthine oxidoreductase ...
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Identification of Acinetobacter Species and Genotyping of Acinetobacter baumannii by Multilocus PCR and Mass Spectrometry
... measures. Genotyping allows investigation of clonal spread and can be used to identify the source of the original ...(38), multilocus enzyme electrophoresis (34), and DNA-based methods, including repetitive ...
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Genotyping Encephalitozoon cuniculi by Multilocus Analyses of Genes with Repetitive Sequences
... the genotyping studies have employed the ITS as the diagnostic ...the genotyping techniques involve DNA sequencing, the use of these tech- niques is largely restricted to a few research laboratories ...
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