Peptide sequence
Nuclear magnetic resonance seq (NMRseq): a new approach to peptide sequence tags
... G sequence, to validate the NMRseq prediction method, the sequence was also confirmed using MS/MS ...purified peptide with the mass of ...to sequence venom peptides from a number of species of ...
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The Signal Peptide Sequence Impacts the Immune Response Elicited by a DNA Epitope Vaccine
... other derived from a secreted molecule, the rat KC chemokine (16), to determine the impact of the leader sequence on the immunogenicity of DNA epitope vaccines. Based on our re- sults, the use of the rat KC ...
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Immunological significance of cytotoxic T lymphocyte epitope variants in patients chronically infected by the hepatitis C virus
... variant peptide sequences that emerged at T2 were tested for the ability to escape the CTL re- ...35 peptide in Patient 10 and variant NS4B 1807 peptide in Patient 13 were immunogenic themselves ...
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Comparison of protein expression lists from mass spectrometry of human blood fluids using exact peptide sequences versus BLAST
... the sequence coverage of MS/MS peptides is too small to determine unequivocally which protein the sequence is derived from and therefore can only be used to report types of proteins ...MS/MS peptide ...
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Sequence adaptive peptide-polysaccharide nanostructures by biocatalytic self-assembly
... (i) peptide components should undergo a fully reversible amide condensation and hydrolysis, but should not give rise to significant self-assembly in the absence of the polysaccharide template ...between ...
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Locust ion transport peptide (ITP): primary structure, cDNA and expression in a baculovirus system
... acid sequence of the cDNA with the partial amino acid sequence of purified ITP obtained by Audsley et ...ITP peptide sequence determined by Audsley et ...acid sequence from the cDNA ...
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NGFFFamide and echinotocin: structurally unrelated myoactive neuropeptides derived from neurophysin containing precursors in sea urchins
... the sequence of this protein revealed that residues 87–98 comprised a vasopressin/oxytocin-like peptide sequence (CFISNCPKG) followed by a potential substrate for C-terminal amidation (G) and a ...
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Limited Variation in BK Virus T Cell Epitopes Revealed by Next Generation Sequencing
... restricted peptide sequences and 1 HLA-B0702- and HLA-B08- restricted peptide sequence, as previously described, were evalu- ated for nonsynonymous mutations in patient samples (24, ...BKV ...
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Peptide substrate identification for yeast Hsp40 Ydj1 by screening the phage display library
... the peptide substrates for Hsp40-Ydj1, we took advantage of a commercially available M13 phage peptide display library from New England ...phage peptide display library screen has been shown to be a ...
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A New Method to Assay Protease Based on Amyloid Misfolding: Application to Prostate Cancer Diagnosis Using a Panel of Proteases Biomarkers
... the peptide probes for the target ...substrate sequence of target proteases, as well as the seed peptide sequence that can accelerate the misfolding of ...seed peptide will be removed ...
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Identification and Characterization of a Peptide That Specifically Binds the Human, Broadly Neutralizing Anti-Human Immunodeficiency Virus Type 1 Antibody b12
... The peptide displayed by only one clone, ...this peptide sequence shares similarities with those of other clones from the B2 sublibrary, and even more similarity with the Ed2 sequence, in the ...
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Polymeric peptide pigments with sequence-encoded properties
... Nanoscale morphologies were determined by transmission electron microscopy (TEM) (Fig. 2A) and AFM showing that nanostructures’ stiffness depends on peptide sequence (Fig. S3). YFD and DFY assemble into a ...
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Creation of a federated database of blood proteins: a powerful new tool for finding and characterizing biomarkers in serum
... a peptide from any pro- tein sequence(s). The same peptide, and therefore pro- tein(s), may be detected in replicate experiments and the redundant peptide count provided yields an estimate of ...
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Complete nucleotide sequence of the nucleoprotein gene of influenza B virus.
... In this report, nucleotide sequence predicted amino acid peptide of a type B we present the complete of the NP gene and the sequence of the NP poly- influenza virus B/Singapore/222/79 [B[r] ...
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Evaluating the Effect of Protein A Signal Peptide on Extracellular Expression of Recombinant Hirudin in E.Coli
... signal peptide) was applied in this study to evaluate the performance of signal peptide on extracellular secretion ...signal sequence (protein A), it also has two synthetic Z domains for a ...
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The 67 kD elastin/laminin binding protein is related to an enzymatically inactive, alternatively spliced form of beta galactosidase
... and sequence homology to the 67-kD EBP, suggesting that the two might be the ...synthetic peptide, N-Ac-GSPSAQDEASPL, corresponding to a frame-shift-generated sequence unique to the alternatively ...
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Crystal Structure of the Marburg Virus Nucleoprotein Core Domain Chaperoned by a VP35 Peptide Reveals a Conserved Drug Target for Filovirus
... IMPORTANCE Historically, Marburg virus (MARV) has caused severe disease with up to 90% lethality. Among the viral proteins produced by MARV, NP and VP35 are both multifunctional proteins that are essential for viral ...
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A cecropin like antimicrobial peptide with anti inflammatory activity from the black fly salivary glands
... Black flies (Diptera: Simuliidae) are annoying biting pests of humans and animals. They serve as obligate vectors for serious diseases such as human onchocercia- sis (river blindness) and numerous arboviruses of live- ...
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Analysis of Euglena gracilis Plastid-Targeted Proteins Reveals Different Classes of Transit Sequences
... expressed sequence tag (EST) clusters (derived from 19,013 individual ESTs) for full-length proteins that are plastid localized to characterize their targeting sequences and to infer potential modes of ...signal ...
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Switching to fast growth: the insulin like growth factor (IGF) system in skeletal muscle of Atlantic salmon
... IGFBP-5 has been shown to stimulate mitogenesis in other species, although it is worth noting that in this experiment it was the IGFBP-5.2 paralogue that was upregulated in response to feeding and this protein lacks a ...
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