The 16S rRNA gene
Detection of Mycoplasma genitalium by PCR Amplification of the 16S rRNA Gene
... the 16S rRNA gene was determined for ...MgPa gene, were 100% homologous, although they carried a single common base substitution compared to the type ...
6
Detection of Kanamycin ResistantMycobacterium tuberculosis by Identifying Mutations in the 16S rRNA Gene
... the 16S rRNA gene and 38 bp of the intervening sequence between the 16S and the 23S rRNA genes were made by PCR and were used for PCR-based direct ...
6
DETECTION OF BACTERIA BY AMPLIFYING THE 16S rRNA GENE WITH UNIVERSAL PRIMERS AND RFLP
... the 16S rRNA gene of bacteria which can be amplified by the universal PCR ...ofthe 16S rRNA gene, in common bacterial ...
6
Pipeline for amplifying and analyzing amplicons of the V1–V3 region of the 16S rRNA gene
... of 16S rRNA gene sequences is an important tool for testing hypotheses in complex microbial communities, and analysis methods must be updated and validated as sequencing technologies ...the ...
6
Mechanisms of streptomycin resistance: selection of mutations in the 16S rRNA gene conferring resistance
... single rRNA allelic eubacterium carrying a multitude of stably integrated rpsL genes, allows selection of streptomycin resistance-conferring mutations in the 16S rRNA ...single rRNA allelic ...
10
Identification of Nocardia Species by Restriction Endonuclease Analysis of an Amplified Portion of the 16S rRNA Gene
... Nocardia 16S rRNA gene and subsequent restriction endonuclease analysis (REA) for species ...the 16S rRNA gene and the 65-kDa heat shock protein (HSP) ...a 16S rRNA ...
7
Sequence Polymorphism of the 16S rRNA Gene of Vibrio vulnificus Is a Possible Indicator of Strain Virulence
... possessing 16S rRNA type B and those that caused illness or death (Table 3, P ⬍ ...B 16S rRNA allele (3) and the potential virulence of a given ...the 16S rRNA gene ...
6
Identification of Chlamydia pneumoniae by DNA amplification of the 16S rRNA gene
... psittaci were described for PCR by using two primer sets (lA-lB and 2A-2B) derived from the 16S rRNA sequence of.. Chlamydia spp.[r] ...
5
Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians
... mitochondrial 16S rRNA gene fulfills the requirements for a universal DNA barcoding marker in ...studied 16S fragment is superior to COI. Amplification success was 100% for 16S in a ...
12
reaction and 16S-rRNA gene sequences
... and 16S- rRNA gene ...with 16S-rRNA gene sequences followed by cluster analysis using the results of ...the 16S-rRNA gene indicated that the isolate 13C of ...
6
Sequence Diversity of Neisseria meningitidis 16S rRNA Genes and Use of 16S rRNA Gene Sequencing as a Molecular Subtyping Tool
... of 16S rRNA genes among Neisseria meningitidis strains (Men) and evaluated the use of this approach as a molecular subtyping ...the 16S rRNA gene from 264 Men strains of serogroups A, ...
8
Determination of the etiology of presumptive feline leprosy by 16S rRNA gene analysis
... the 16S rRNA gene have proven to be of value for the diagnosis of infections caused by mycobacterial species of veterinary origin ...The 16S rRNA gene is highly con- served ...
8
Catheter Related Microbacterium Bacteremia Identified by 16S rRNA Gene Sequencing
... the gene sequences of bacterial species has shown that the 16S rRNA gene is highly conserved within a species and among species of the same ...the 16S rRNA gene sequence ...
5
The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales
... Results: Several new introns were identified and their insertion loci were constrained to thirteen locations across the 16S rRNA gene. Many of these introns encode homing endonucleases, although some ...
10
A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis
... One hundred ninety single colonies were picked from a collection of upper respiratory tract culture isolates (URTCul) and restreaked until pure on appropriate solid agar plates as described in [36]. Once pure, isolates ...
13
Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification
... 111 16S rRNA database that are pre- dicted to amplify using a given primer ...The 16S rRNA gene contains numerous point mutations and insertion-deletion ...the 16S rRNA ...
19
Analysis, Optimization and Verification of Illumina-Generated 16S rRNA Gene Amplicon Surveys
... sequencing 16S rRNA genes has expanded with low-cost, high-throughput sequencing ...Illumina-based 16S rRNA gene sequencing has recently gained popularity over 454 pyrosequencing due to ...
15
Analysis, optimization and verification of Illumina-generated 16S rRNA gene amplicon surveys
... sequencing 16S rRNA genes has expanded with low-cost, high-throughput sequencing ...Illumina-based 16S rRNA gene sequencing has recently gained popularity over 454 pyrosequencing due to ...
14
Three Cases of Anaerobiospirillum succiniciproducens Bacteremia Confirmed by 16S rRNA Gene Sequencing
... the 16S rRNA genes of the isolates revealed no close relatives (organisms likely to be in the same genus) in the sequence databases, nor were any sequence data available for ...the 16S rRNA ...
5
Comparison of 16S rRNA Gene PCR and BACTEC 9240 for Detection of Neonatal Bacteremia
... Comparison of PCR and culture results for 548 paired blood samples from infants admitted to the NICU for sepsis evalu- ations. A total of 548 discarded blood samples obtained from infants admitted to the NICU for ...
5