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Transcription Start Site

A cis Repression Sequence Adjacent to the Transcription Start Site of the Human Cytomegalovirus US3 Gene Is Required  To Down Regulate Gene Expression at Early and  Late Times after Infection

A cis Repression Sequence Adjacent to the Transcription Start Site of the Human Cytomegalovirus US3 Gene Is Required To Down Regulate Gene Expression at Early and Late Times after Infection

... US3 transcription start site in which the gene downstream of the US3 promoter was replaced with the indicator gene chloramphenicol acetyltransferase ...the transcription of the US3 gene, whose ...

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Transcription factor binding sites downstream of the human immunodeficiency virus type 1 transcription start site are important for virus infectivity.

Transcription factor binding sites downstream of the human immunodeficiency virus type 1 transcription start site are important for virus infectivity.

... scription start site could cause additional cellular specificity, increase the strength of the promoter-enhancer unit located in the LTR, or provide a mechanism to broaden the viral re- sponse to ...

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Role of the Transcription Start Site Core Region and Transcription Factor YY1 in Rous Sarcoma Virus Long Terminal Repeat Promoter Activity

Role of the Transcription Start Site Core Region and Transcription Factor YY1 in Rous Sarcoma Virus Long Terminal Repeat Promoter Activity

... of transcription start site elements that contribute to basal tran- scriptional activity in a different ...the transcription start site could influence the formation of a ...

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Efficient transcription from the rice tungro bacilliform virus promoter requires elements downstream of the transcription start site.

Efficient transcription from the rice tungro bacilliform virus promoter requires elements downstream of the transcription start site.

... the transcription start site (bent arrow) is indicated below, showing the relevant parts of the CaMV 35S promoter sequence (underlined), polylinker (lower case), and RTBV leader ...

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dKDM5/LID regulates H3K4me3 dynamics at the transcription start site (TSS) of actively transcribed developmental genes

dKDM5/LID regulates H3K4me3 dynamics at the transcription start site (TSS) of actively transcribed developmental genes

... the transcription-start site (TSS) of active genes and is known to be important for transcription ...to transcription remain largely ...

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Binding of the herpes simplex virus immediate-early gene product ICP4 to its own transcription start site.

Binding of the herpes simplex virus immediate-early gene product ICP4 to its own transcription start site.

... Given the idea that upstream regions of IE genes contain sequences which respond to viral and perhaps cellular 40 trans-acting factors, a different approach was used to systematically se[r] ...

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Transcriptional activation and DNase I hypersensitive sites are associated with selective expression of the gastrin releasing peptide gene

Transcriptional activation and DNase I hypersensitive sites are associated with selective expression of the gastrin releasing peptide gene

... primary transcription based on nuclear run on ...single transcription start site for GRP mRNA, and near this site we find four DNase I hypersensitive ...of transcription of the ...

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Gene Regulation 2.ppt

Gene Regulation 2.ppt

... • Promoter-proximal elements are located just upstream of the promoter and the transcription start site, and have sequences that are unique to specific genes, providing a mechanism fo[r] ...

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The Mutant Phenotype Associated With P-Element Alleles of the vestigial Locus in Drosophila melanogaster May Be Caused by a Readthrough Transcript Initiated at the P-Element Promoter

The Mutant Phenotype Associated With P-Element Alleles of the vestigial Locus in Drosophila melanogaster May Be Caused by a Readthrough Transcript Initiated at the P-Element Promoter

... the site we report. of embryo RNA (lane 3). Significantly, this site was lo- Confirmation of the assignment of the P start site was cated on the genomic DNA 435 nucleotides upstream obtained ...

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Enhancer promoter communication at the Drosophila engrailed
locus

Enhancer promoter communication at the Drosophila engrailed locus

... the transcription factor GAGA, which are located just upstream of the transcription start ...en transcription start site and from –40 to –25 bp upstream of the inv ...

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Regulation of serine protease inhibitor Kazal type-5 (SPINK5) gene expression in the keratinocytes

Regulation of serine protease inhibitor Kazal type-5 (SPINK5) gene expression in the keratinocytes

... Results Luciferase assay targeting the SPINK5 promoters (nucleotide -676/-532 and -318/-146 from the major transcription start site) showed high intensity in NHEK human keratinocyte. These two sites ...

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The Epstein-Barr Virus Promoter Initiating B-Cell Transformation Is Activated by RFX Proteins and the B-Cell-Specific Activator Protein BSAP/Pax5

The Epstein-Barr Virus Promoter Initiating B-Cell Transformation Is Activated by RFX Proteins and the B-Cell-Specific Activator Protein BSAP/Pax5

... the transcription start site ...of transcription factors, is highly lineage restricted in its expression, being found only in B lymphocytes, in the developing brain, and in adult testis ...the ...

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Nuclear Respiratory Factor 1 Plays an Essential Role in Transcriptional Initiation from the Hepatitis B Virus X Gene Promoter

Nuclear Respiratory Factor 1 Plays an Essential Role in Transcriptional Initiation from the Hepatitis B Virus X Gene Promoter

... to transcription start site 1 of the X ...gene transcription by overexpression of PGC-1 or PRC together with NRF1 in HepG2 cells have been unsuccessful ...binding site in regulation of ...

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Sequence evolution of the Drosophila heat shock locus hsr omega. I. The nonrepeated portion of the gene.

Sequence evolution of the Drosophila heat shock locus hsr omega. I. The nonrepeated portion of the gene.

... This region is conserved among the loci (1 6 nucleotides identical out of 23; Figure 8) and for all three loci shows homology to sequences at the transcription start site [r] ...

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Aberrant DNA hypermethylation of the ITIH5 tumor suppressor gene in acute myeloid leukemia

Aberrant DNA hypermethylation of the ITIH5 tumor suppressor gene in acute myeloid leukemia

... the transcription start site of the ITIH5 tumor suppressor gene in leukemia cell lines and primary samples from patients with acute myeloid leukemia (AML) as well as the potential use of ...

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Hantsche, Merle A.
  

(2016):


	Structure of the closed Pol II transcription initiation complex and implications for promoter opening.


Dissertation, LMU München: Fakultät für Chemie und Pharmazie

Hantsche, Merle A. (2016): Structure of the closed Pol II transcription initiation complex and implications for promoter opening. Dissertation, LMU München: Fakultät für Chemie und Pharmazie

... Figure 5: Open complex structure at 3.6 Å resolution. a, Domain organisation of yeast basal transcription factors TBP, TFIIA, -B, -E, and -E. Solid and dashed black bars indicate protein regions that are present ...

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Chromatin Structure of the Simian Virus 40 Late Promoter: a Deletional Analysis

Chromatin Structure of the Simian Virus 40 Late Promoter: a Deletional Analysis

... late transcription start site (MF9), and the combination of the TFIID and major late transcription start sites (MF10) analyzed in the presence of an early ...restriction site per ...

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MIEN1 is tightly regulated by SINE Alu methylation in its promoter

MIEN1 is tightly regulated by SINE Alu methylation in its promoter

... and transcription factor binding are widely responsible for gene transcription ...gene transcription by directly providing binding access to promoter and enhancer elements which mostly results in ...

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The Rous Sarcoma Virus Long Terminal Repeat Promoter Is Regulated by TFII-I

The Rous Sarcoma Virus Long Terminal Repeat Promoter Is Regulated by TFII-I

... the transcription start site core (TSSC), present in the core promoter of the RSV LTR, that is required for efficient viral expression and is reg- ulated in part by the multifunctional Inr-binding ...

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Identification of a Boundary Domain Adjacent to the Potent Human Cytomegalovirus Enhancer That Represses Transcription of the Divergent UL127 Promoter

Identification of a Boundary Domain Adjacent to the Potent Human Cytomegalovirus Enhancer That Represses Transcription of the Divergent UL127 Promoter

... PmeI site downstream of the EGFP ...the transcription start site of the MIEP that contain 10 mismatched nucleotides, disrupting the NF-1 site 5⬘ proximal to the UL127 TATA ...

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