TYPING METHODS
Analysis of Typing Methods for Epidemiological Surveillance of both Methicillin Resistant and Methicillin Susceptible Staphylococcus aureus Strains
... ferent typing methods over time. PFGE has been the standard typing technique during this period due to its high discrimina- tory power and relatively low cost per ...spa typing and MLST ...
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Discriminatory Power and Reproducibility of Novel DNA Typing Methods for Mycobacterium tuberculosis Complex Strains
... DNA typing methods have been developed which are faster and easier to perform than the current internationally standardized IS6110 restriction fragment length polymorphism typing ...novel ...
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Challenges for Standardization of Clostridium difficile Typing Methods
... The development of typing methods, in particular, ribotyp- ing, has facilitated understanding of the epidemiology of C. difficile since the late 1990s. Strains of C. difficile with appar- ently increased ...
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Comparison of three typing methods for clinical and environmental isolates of Aspergillus fumigatus
... one typing method led to an increase in strain ...between methods was generally ob- served, the concordance among methods was not always obvi- ...different typing methods, and by other ...
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Review on Molecular Typing Methods of Pathogens
... PCR typing methods using primers designed on the basis of the following specific sequences: conserved ribosomal gene spacer sequence (RS), repetitive extragenic palindromic sequence (REP), and ...
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Evaluation of the Discriminatory Power of Typing Methods for Neisseria gonorrhoeae
... of typing systems, including conventional auxotyping and serotyping and the molecular methods of arbitrarily primed PCR (AP-PCR), amplified ribosomal-DNA restriction analysis (ARDRA), opa typing, and ...
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Application of a numerical index of discriminatory power to a comparison of four physiochemical typing methods for Candida albicans
... Four typing methods for the strain differentiation of Candida albicans morphotyping, resistotyping, extracellular enzyme production, and carbon source assimilation reactions were compare[r] ...
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Diagnostic and typing methods for investigating Legionella infection
... Well-established methods such as culture for Legionella and urinary Legionella antigen detection remain the main- stay of diagnosis of Legionella ...Newer methods, including PCR-based assays, are likely to ...
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Characterization of Extended Spectrum β Lactamase Producing Salmonella typhimurium by Phenotypic and Genotypic Typing Methods
... phenotypic methods, including biotyp- ing, serotyping, phage typing, and determination of antibiotic susceptibility patterns, and by genotypic techniques such ...
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Nosocomial infection by Staphylococcus haemolyticus and typing methods for epidemiological study
... We report a case of infection with serious illness and bacteremia in a leukemic patient with a Staphylococcus haemolyticus strain that showed reduced susceptibility to vancomycin and tei[r] ...
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Investigation of an outbreak of antibiotic associated colitis by various typing methods
... Isolate 415, cultured from a patient who 1 week earlier had carried the major strain, was the only nontoxigenic isolate; the crossed IEP and protein patterns of this isolate were also di[r] ...
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Application of DNA typing methods to epidemiology and taxonomy of Candida species
... A random sample of six Candida albicans clinical isolates subjected to the DNA extraction, digestion, and electrophoresis methods described above revealed sharp gel patterns, with >100 i[r] ...
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Comparison of restriction endonuclease analysis and phenotypic typing methods for differentiation of Yersinia enterocolitica isolates
... The discriminatory power of the method was compared with H-antigen typing, biotyping, phage typing, antimicrobial susceptibility typing, and restriction enzyme analysis of the virulence [r] ...
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Comparison of molecular typing methods for Candida albicans
... The RFLPs with highly repeated DNA yield 6 types, the 27A RFLPs yield 10 types, and the electrophoretic karyotypes yield 9 types when the smaller chromosomes are examined and 5 types whe[r] ...
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Comparison of the DiversiLab Repetitive Element PCR System with spa Typing and Pulsed Field Gel Electrophoresis for Clonal Characterization of Methicillin Resistant Staphylococcus aureus
... Molecular typing methods have been developed to identify clonality of strains and monitor spread of ...spa typing, spa clonal cluster analysis, and pulsed-field gel electrophoresis (PFGE) in terms of ...
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CRISPR typing and subtyping for improved laboratory surveillance of salmonella infections
... for typing methods for use in bacterial epidemiology [10]) for only two Salmonella serotypes, Typhimurium and Enteritidis ...subtyping methods, such as PFGE or phage ...
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Comparative study of five different DNA fingerprint techniques for molecular typing of Streptococcus pneumoniae strains
... genotypical methods have been developed to assist in epidemiological ...These methods include serotyping (9, 16, 18, 19), multilocus enzyme electrophoresis (15), penicillin-binding protein typing ...
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Diversity of Strains of Salmonella enterica Serotype Enteritidis from English Poultry Farms Assessed by Multiple Genetic Fingerprinting
... discriminative methods are needed for differentiating individual strains of Salmo- nella enterica serotype Enteritidis beyond the phenotypic level; however, a consensus has not been reached as to which molecular ...
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Typing multidrug resistant Staphylococcus aureus: conflicting epidemiological data produced by genotypic and phenotypic methods clarified by phylogenetic analysis
... Two typing methods, phage typing and restriction fragment length polymorphism (RFLP) by pulsed-field gel electrophoresis (RFLP- PFGE), gave conflicting results which were clarified by phylogenetic ...
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DNA typing of isolates associated with the 1988 sporotrichosis epidemic
... the source of the 1988 sporotrichosis epidemic by using molecular DNA typing methods to compare the clinical and environmental isolates associated with the outbreak.. Also, the possible [r] ...
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