cladistic analysis
Cladistic analysis of genotype data application to GAW15 Problem 3
... the analysis, but will allow us to efficiently exploit cladistic analysis techniques that are known to perform well in haplotype-based con- ...
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Anthocyanins of Bignoniaceae. II. Additional Data and Cladistic Analysis
... The present report extends the survey base of Bignoniaceae floral anthocyanins, applies a cladistic analysis to that data set, and presents caveats regarding the applicatio[r] ...
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A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping or DNA sequencing. V. Analysis of case/control sampling designs: Alzheimer's disease and the apoprotein E locus.
... Therefore, a strong marginal association of AD with the € 4 allele is expected even though the cladistic analysis indicates that the evo- lutionary transition between the [r] ...
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Nested Cladistic Analysis Indicates Population Fragmentation Shapes Genetic Diversity in a Freshwater Mussel
... nested cladistic method to the more traditional analysis of variance approach in a study of intraspecific genetic variation in the freshwater mussel, Lampsilis ...nested cladistic analysis and ...
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Cladistic analysis of Rheochlus and related genera, with description of a new species (Diptera: Chironomidae: Podonominae)
... A cladistic analysis of the genus Rheochlus within the tribe Podonomini is presented, and the phylogenetic relationship with congeners is discussed based on adult ...
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A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination.
... T o perform a cladistic analysis of phenotypic asso- ciation, we need to nest haplotypes (0-step clades in.. In this simple example, five clades are considered that ar[r] ...
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A Cladistic Analysis of Phenotypic Associations With Haplotypes Inferred From Restriction Endonuclease Mapping. I. Basic Theory and an Analysis of Alcohol Dehydrogenase Activity in Drosophila
... Because some genes have been cloned that have a known biochemical or physiological function, genetic variation can be measured in a population at loci that may directly influence[r] ...
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A comparative phenetic and cladistic analysis of the genus Holcaspis Chaudoir (Coleoptera: Carabidae)
... Figure 6.6 A most parsimonious tree generated from morphological, allozyme (locus) and random amplified polymorphic DNA character data sets using character congruence [r] ...
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A cladistic analysis of phenotype associations with haplotypes inferred from restriction endonuclease mapping. II. The analysis of natural populations.
... In this paper, we apply the quantitative genetic concept of average excess to evaluate the phenotypic effect of a haplotype or group of haplotypes stratified and contra[r] ...
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Design of an expert system to perform cladistic analysis
... 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 forwing forwing pre-papillae plate absent pre-papillae plate present pre-papillae plate reduced anellar o[r] ...
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Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum.
... Hence, with restricted gene flow, we either expect the average clade distances to increase with clade level within a nested series, or to level off while simultane- o[r] ...
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A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.
... Starting at the ends of the DNA region being ex- amined, keep adding additional sites and constructing maximum parsimony cladograms until there is evi- dence for [r] ...
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Cladistic relationships among the Pleurotus ostreatus complex, the Pleurotus pulmonarius complex, and Pleurotus eryngii based on the mitochondrial small subunit ribosomal DNA sequence analysis
... The cladistic analysis of the V4 domain se- quences, performed by UPGMA, the neighbor-joining, and parsimony methods, revealed that the 19 Pleurotus strains tested in this study evolved along three ...
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A re-examination of the enigmatic Russian tetrapod Phreatophasma aenigmaticum and its evolutionary implications
... two cladistic ma- trices, the first a global analysis of basal synapsids and the second devoted to caseids, Phreatophasma is found to oc- cupy a basal position within caseids, retaining plesiomorphic ...
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Cladistic Structure Within the Human Lipoprotein Lipase Gene and Its Implications for Phenotypic Association Studies
... A cladistic analysis of pheno- sequences, one novel base substitution and two tentative hotspot typic associations with haplotypes inferred from restriction endo- mutations in the Hypoxanthine ...
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The Composite Species Concept: A Rigorous Basis for Cladistic Practice
... by cladistic analysis, the taxonomist hypothesizes ...that cladistic analysis programs, such as PAUP (Swofford, 1991) and CAFCA (Zandee, 1991), indicate to be the best-supported solution ...
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Cladistic grouping of haplotypes in association analysis
... haplotype analysis, we adapt the con- cepts of cladistic analysis and propose a grouping algorithm to cluster rare haplotypes to the corresponding ancestral ...ciation analysis based on groups ...
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Patterns of Evolution in Iranian Tribal Textiles
... a cladistic analysis of 122 decorative and technical characters from six tribal groups, the Yomut, Shahsevan, Qashqai, Boyer Ahmad, Papi and ...the analysis inferred the most parsimonious tree for ...
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6historical pdf
... judgements that the linguist makes in establishing the character sets used as input to the process. In fact Nakhleh et al. (nd) conclude their methodological study with the sobering suggestion that “it seems possible ...
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Approach to a Comparative Study of the Metabolism of Porphyrins and Chlorophylls
... using cladistic procedures, unlike others, allow crawl the changes in this ...a cladistic analysis is an evolutionary hypothesis, a hypothesis about the evolution of metabolism of porphyrins and ...
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