DNA Barcodes
Comparative genomics of 11 complete chloroplast genomes of Senecioneae (Asteraceae) species: DNA barcodes and phylogenetics
... much-needed DNA barcodes for spe- cies identification and phylogenetic reconstructions within the tribe, while the cpSSRs provides potential markers for future population-level research in each respective ...
17
Supervised DNA Barcodes species classification: analysis, comparisons and results
... well-established DNA Barcode classification techniques, as phylogenetic trees (NJ, PAR), similarity-based (BLAST), and character-based (DNA-BAR, BLOG) ...the DNA Barcode species classification ...
18
DNA barcodes confirm the taxonomic and conservation status of a species of tree on the brink of extinction in the Pacific
... from the Seychelles eastward to Sri Lanka, Southeast Asia, Taiwan, Australia, and the Pacific. Although several subtribes of Timonius have been taxonomically revised, virtually no molecu- lar phylogenetic work has been ...
14
Plant DNA barcodes can accurately estimate species richness in poorly known floras
... whether DNA barcoding will be advanced by new emerging genomic technologies or become superseded by ...plant DNA barcodes remains elusive in the quest to distinguish species with a standardized ...
9
Evaluation of seven DNA barcodes for differentiating closely related medicinal Gentiana species and their adulterants
... total DNA was extracted by a modified CTAB extraction method with a minor modification [18] that the DNA pellet was resuspended in 30 μL of water instead of 50 μL of Tris-EDTA ...the DNA ...
12
Diversity of marine-derived fungal cultures exposed by DNA barcodes: the algorithm matters
... The barcodes produced in this study showed no ambiguous positions ...of DNA barcodes; while they are suitable for tentative identification of isolates they have limited value for estab- lishing ...
22
Invasions, DNA barcodes, and rapid biodiversity assessment using ants of Mauritius
... When introduced ants were excluded from the analyses, the diversity ranking changed. Localities judged to contain the most barcode diversity were affected by excluding spe- cies known to have been introduced species. For ...
12
Emergence of Plastidial Intergenic Spacers as Suitable DNA Barcodes for Arid Medicinal Plant Rhazya stricta
... traits. DNA barcoding is an emerging technology for rapid and accurate species ...chloroplastid barcodes were inves- tigated for the authentication of ...the DNA sequences from fifty locally ...
16
Generation of DNA barcodes in Indian mottled EEL (Anguilla Bengalensis): A threatened ichthyofauna of Assam, India
... DNA barcodes through this study would plug the voids of database to hammer out interrelations among the ...of DNA barcoding in tagging species, this would create baseline information on molecular ...
9
Identification of aphid (Hemiptera: Aphididae) species of economic importance in Kenya using DNA barcodes and PCR-RFLP-based approach
... In DNA barcoding, sequences were retrieved from 175 aphid samples collected from different agro-ecological zones of ...demonstrated DNA barcoding based on COI gene as a potentially useful tool for ...
10
Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring
... as DNA arrays and DNA bar- codes provide substantial potential for biodiversity mon- ...both DNA arrays and DNA barcodes provide high resolution ...Because DNA arrays might fail ...
7
DNA Barcodes in Fig Cultivars (Ficus carica L ) Using ITS Regions of Ribosomal DNA, the psbA trnH Spacer and the matK Coding Sequence
... Presently, different DNA analysis methods have allowed a precise identification of the different genotypes, and they can be classified into three basic types [4]. One of these categories corresponds to methods ...
9
Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes
... of DNA sequences for spe- cies identification is very limited: after the initial “split”, new sister species will share alleles and mutations in slowly evolving genes ...
15
Reproducibility of Illumina platform deep sequencing errors allows accurate determination of DNA barcodes in cells.
... To investigate whether this visualization helps to de- tect spurious barcodes in our data set with 19 known barcodes, in Fig. 3b we consider one particular spurious barcode which is compared to the possible ...
16
Exploring the diversity of Diplostomum (Digenea: Diplostomidae) in fishes from the River Danube using mitochondrial DNA barcodes
... Genomic DNA (gDNA) was isolated from single meta- cercariae using the ...Tissue DNA Kit (Omega Bio-tek, Norcross, USA) following the manufacturer’s ...MyFi™ DNA Polymer- ase mix (Bioline ...initial ...
21
Authentication of commercial processed Glehniae Radix (Beishashen) by DNA barcodes
... Background: The radix of Glehnia littoralis Fr. Schmidt ex Miq. (Beishashen), is often misidentified and adultered in Chinese medicine. Its seven common adulterants include Chuanminshen violaceum Sheh et Shan ...
9
Identification of Hippophae species (Shaji) through DNA barcodes
... most suitable barcode, with all seven species as well as four H. rhamnoides subspecies clearly identified. None of the selected barcodes were suitable for H. neurocarpa subspecies identification. Although it was ...
11
Revision of the species composition and distribution of Turkish sand flies using DNA barcodes
... After trimming and alignment, the length of the tar- get cox1 sequences ranged from 547 to 630 base pairs. As there were no gaps and stop codons, the data set was revealed to be free of pseudogenes and nuclear insertions ...
20
DNA barcoding detects contamination and substitution in North American herbal products
... degraded DNA due to varied gene copy number and PCR bias; the chemical and physical properties of each piece of DNA can selectively amplify certain se- quences more than others ...possible DNA ...
13
DNA Barcoding of Ricinus communis from Different Geographical Origin by Using Chloroplast matK and Internal Transcribed Spacers
... [3]. DNA barcoding is a method of describing and identify- ing species by analyzing sequence information from one or a few short standardized loci amplified with universal ...of DNA barcodes, the ...
7