expressed genes
Genes Encoding Flower- and Root-Specific Functions are More Resistant to Fractionation than Globally Expressed Genes in Brassica rapa
... triplicate genes showing flower-specific expression could be conducted to identify the role these genes play in developmental pathways and regulatory networks unique to flowers, as well as the degree of ...
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Human brain arteriovenous malformation: an analysis of differential expressed genes
... Those image data is transformed into numerical infoma- tion with the help of Luxscan 3.0 image analyzing soft- ware (CapitalBio corporation). Then normalize those data by Lowes’s method. use two class unpaired in SAM ...
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Selection for the compactness of highly expressed genes in Gallus gallus
... and genes features for human, ...that genes with high functional/regulatory complexity did not have longer introns and longer ...house-keeping genes were not more compact than the narrowly ...
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Statistical Tests for Identification of Differentially Expressed Genes in Microarray Data
... differentially expressed genes, or discriminator genes, are the genes with considerably different expression patterns in two user-defined ...of genes, and which genes are ...
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Detection of differentially expressed genes involved in osteoarthritis pathology
... of genes associated with the development of OA. Differentially expressed genes (DEGs) were identified using four gene expression pro- filing datasets, GSE55235, GSE55457, GSE1919, and GSE12021, based ...
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Aberrantly methylated-differentially expressed genes and pathways in colorectal cancer
... methylated-differentially expressed genes and pathways in CRC by joint bioinformatics analysis of both gene expression and gene methylation microarrays, which may contribute to the finding of molecular ...
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Guided conjugate Bayesian clustering for uncovering rhythmically expressed genes
... interesting genes with proposed functions in the core of the clock ...evening-expressed genes that contribute to the activation of LHY and CCA1 expression (see below) ...REGULATOR genes 3, 5 ...
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Chilling susceptibility in mungbean varieties is associated with their differentially expressed genes
... 52,739 genes have been annotated (Kang et ...differential expressed genes and sequence-changed-protein genes of mungbean and transposon elements, besides bruchid-resistant (Br) genes, ...
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Differentially expressed genes between systemic sclerosis and rheumatoid arthritis
... differentially expressed genes (DEGs) and potential biological path- ways associated with SSc [7] and RA ...of Genes and Genomes (KEGG) pathway analyses were used to perform func- tional enrichment ...
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Detection of differentially expressed genes in the early developmental stage of the mouse mandible
... differentially expressed genes which might be involved in the initiation of ...differentially expressed genes. These genes are functionally related to protein transport, signal ...
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Highly Expressed Genes in Yeast Evolve Slowly
... commonly expressed genes need to act in several different conditions and this may limit DISCUSSION the number of sites within the gene at which mutations will be effectively ...highly expressed ...
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Identification of Differentially Expressed Genes in Papillary Thyroid Cancers
... RT-PCR. Although COL1A1 expression has been demonstrated in tumor cells and tumor-associated stromal cells in multiple cancers, 11 COL1A1 has been reported to be elevated in tumor endothe- lium, compared with normal ...
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A Cluster of Latently Expressed Genes in Kaposi’s Sarcoma-Associated Herpesvirus
... Infection with Kaposi’s sarcoma-associated herpesvirus (KSHV) is closely associated with Kaposi’s sarcoma (KS) and primary effusion lymphoma, with viral genomes present in a latent state in the majority of tumor cells. ...
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Clinical value and potential mechanisms of COL8A1 upregulation in breast cancer: a comprehensive analysis
... Differentially expressed genes; CEGs: Co‑expressed genes; TNBC: Triple‑negative breast cancer; VEGF: Vascular endothelial growth factor; EGFR: Epidermal growth factor receptor; mTOR: Mammalian ...
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Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures
... 430 2.0 Arrays (Affymetrix, Santa Clara, CA). Principal component analysis (PCA) was used to characterize the directions of maximal transcriptomic variance in the whole dataset (Fig. 1, each dot signifies a sample). The ...
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ModuleFinder and CoReg: alternative tools for linking gene expression modules with promoter sequences motifs to uncover gene regulation mechanisms in plants
... co-expressed genes, which explain the observed expression patterns of those ...of genes according to their expression in a set of experiments, for example the output of ...of genes (Figure ...
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T cell transcriptomics from peripheral blood highlights differences between polymyositis and dermatomyositis patients
... tially expressed genes in the CD8+ T-cell subset than in the CD4+ T-cell subset when comparing PM and DM ...176 genes that were differentially expressed between PM and ...two genes, ...
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Transcriptome and proteome profiling of neural stem cells from the human subventricular zone in Parkinson’s disease
... differentially expressed genes in the SVZ between control and PD patients, our proteome analysis revealed several proteins that were differentially expressed in ...of genes and proteins ...
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Whole transcriptome, high throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro
... lowly expressed genes (as detailed for the sense strand data above) led to the exclusion of 6,954 genes, leaving a total of 6,842 genes for differential expression analysis based of antisense ...
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Transcriptome profiling of Camelina sativa to identify genes involved in triacylglycerol biosynthesis and accumulation in the developing seeds
... differentially expressed genes; FDR: false discovery rate; BLAST: basic local alignment search tool; LPAT: lysophosphatidyl acyltransferase; MGAT: monoacylglycerol acyltransferase; PDCT: phosphatidylc ...
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