Fine-mapping: towards the candidate gene
QTL analysis for chalkiness of rice and fine mapping of a candidate gene for qACE9
... Fig. 2 Locations of QTLs on SNP map. Number indicates genetic distance (cM) along each chromosome. HZ represents Hangzhou, HN represents Hainan and RD represents reported QTL Fig. 3 Fine mapping of qACE9 ...
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High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut
... of mapping populations has facilitated development of high-density genetic maps essential for fine mapping and candidate gene discovery for traits of interest in crop ...conducted ...
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QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple
... This candidate gene mapping approach was based on an in silico identification and a genetic mapping of genes potentially involved in the polyphenol pathway and its ...of candidate genes ...
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QTL analysis and candidate gene mapping for the polyphenol content in cider apple
... This candidate gene mapping approach was based on an in silico identification and a genetic mapping of genes potentially involved in the polyphenol pathway and its ...of candidate genes ...
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Fine Mapping and Characterization of the iap Gene in Sorghum [Sorghum bicolor (L.) Moench]
... Iap gene has been reduced to approximately 48 kb on the short arm of chromosome ...each candidate gene revealed very little homology in predicted protein sequence between Tx3361 and the reference ...
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Optimal Designs for Linkage Disequilibrium Mapping and Candidate Gene Association Tests in Livestock Populations
... lowest animals. In such cases, selection among animals with power of fine mapping and possibly the optimal strategy of selective genotyping. We simulated a decreased N e in the later the same phenotype was ...
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Genetic Analysis and Fine Mapping of the RK4 Gene for Round Kernel in Rice ( Oryza sativa L.
... interested gene based on an intensive ge- netic and physical ...The gene was named RK4 after RK1, RK2 and RK3, and was placed between the markers LSTS5-77 and LSTS5-60 in the BAC clone ...six ...
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Isolation and fine mapping of Rps6: An intermediate host resistance gene in barley to wheat stripe rust
... assist gene isolation studies (Mayer et ...step towards a draft genome sequence was made when the International Barley Genome Sequencing Consortium pub- lished a ...the gene space was made by ...
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A bioinformatic and transcriptomic approach to identifying positional candidate genes without fine mapping: an example using rice root-growth QTLs
... in gene expression rather than by polymorphisms in the coding DNA ...didate gene regions (Table 4) are good candidate ...this gene as a good ...the gene shows N 70% similarity to ...
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Mapping and fine-mapping of genetic factors affecting bovine milk composition
... to fine-map BTA17 with imputed 777k single nucleotide polymorphism (SNP) genotypes in order to identify candidate genes associated with milk FA ...(PGRMC2) gene. This gene has not been ...
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Candidate Gene Association Mapping of Arabidopsis Flowering Time
... through candidate gene association mapping using 51 flowering time ...time gene SNPs in an independent recombinant inbred line population derived from the intercrossing of 19 ...both ...
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Linkage Mapping of 1454 New Maize Candidate Gene Loci
... of candidate genes putatively involved in agriculturally important ...toward mapping of these genes, we used two populations of intermated recombinant inbred lines (IRILs), which allow a higher map ...
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Fine mapping, physical mapping and development of diagnostic markers for the Rrs2 scald resistance gene in barley
... resolution with a collection of 44 winter wheat cultivars compared to a RIL population. In our study this approach was anticipated to reveal markers which could break the co-segregation of the flanking markers 693M6-71 ...
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Fine mapping and gene cloning in the post-NGS era: advances and prospects
... genetic mapping procedures. For fine mapping in the past, the coarse mapping-based information was used for refining the underlying genomic region by bringing more and more ...QTL ...
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Fine-mapping of the HNF1B multicancer locus identifies candidate variants that mediate endometrial cancer risk
... three candidate causal SNPs located in the extended HNF1B promoter are associated with reduced promoter activity in vitro, suggesting that these SNPs are likely to be asso- ciated with reduced HNF1B expression in ...
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Fine-mapping of the HNF1B multicancer locus identifies candidate variants that mediate endometrial cancer risk
... three candidate causal SNPs located in the extended HNF1B promoter are associated with reduced promoter activity in vitro, suggesting that these SNPs are likely to be asso- ciated with reduced HNF1B expression in ...
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Molecular cloning and genetic mapping of the t complex responder candidate gene family.
... Here, we describe the molecular cloning of the four members of the T66 gene family, the genetic mapping of these genes to three adjacent t haplotype loci, and c[r] ...
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Fine Mapping of the Friend Retrovirus Resistance Gene, Rfv3, on Mouse Chromosome 15
... resistance gene that operates through an unknown mechanism to control the development of the virus-neutralizing antibody response required for recovery from infection with Friend ...Rfv3 gene was previously ...
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FINE-STRUCTURE MAPPING AND MUTATIONAL STUDIES OF GENE CONTROLLING YEAST CYTOCHROME c
... The alterations, except for one instance, are single amino acid substitutions which are located at six different residue positions (SHERMAN, STEWART, PARKER, INHABER, SHIPMAN, PU[r] ...
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Fine physical mapping of Ph1, a chromosome pairing regulator gene in polyploid wheat.
... Chromosome deletion lines: The chromosome deletion lines used for the physical mapping of the Phl gene and restriction fragment length polymorphism (RFLP) markers were gen[r] ...
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