genomic analyses
Morphologic and Genomic Analyses of New Isolates Reveal a Second Lineage of Cedratviruses
... phylogenetic analyses based on different NCLDV genes (NCVOGs) including those coding for the family B DNA polymerase (NCVOG0038) ...phylogenetic analyses using the D6/D11 helicase (NCVOG0031), DNA repair ...
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Genomic Analyses Reveal the Common Occurrence and Complexity of Plasmodium vivax Relapses in Cambodia
... stage remains largely mysterious as patient studies are confounded by reinfections and the difficulties encountered in attempts to differentiate true relapses from possible parasite recrudescence after treatment. Several ...
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Genomic and post-genomic analyses of human prion diseases
... patients with various forms of prion diseases (variant, sporadic, iatrogenic CJD and historical kuru patients [30]) in comparison with healthy British and South Fore (for kuru) people. Genomic DNA was mostly ...
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Genomic Analyses of Recombinant Adenovirus Type 11a in China
... tree analyses and construc- tions were conducted by using the Mega program (version ...Recombination analyses among HAdV strains 11p,14, 34, 35, and QS were performed with SimPlot software (Johns Hopkins ...
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Genetic and Genomic Analyses Reveal Boundaries between Species Closely Related to Cryptococcus Pathogens
... Comparison of chromosome-level genome assemblies revealed significant dif- ferences between the three species. Postzygotic reproductive isolation between C. amylolentus and DSM27421 could be attributed to genetic ...
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Genomic analyses with biofilter 2.0: knowledge driven filtering, annotation, and model development
... new analyses investi- gating the relationship between genetic architecture and outcome traits, as well as pro- vide more information for interpreting analysis ...” analyses, such as genome-wide association ...
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Functional genomic analyses of Enterobacter, Anopheles and Plasmodium reciprocal interactions that impact vector competence
... shotgun genomic library was prepared from the extracted DNA and sequenced using the 454 GS FLX Titanium sequencing platform at the Genome Resource Center at the Institute for Genome Sciences (IGS) of the ...
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Genomic analyses of early peri-implant bone healing in humans: a systematic review
... Morphogenesis of osseointegration and assessment of the degree of bone-to-implant contact is usually performed by means of histological evaluation [12], while the under- lying molecular processes may be more precisely ...
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Comparative genomic analyses of a virulent pseudorabies virus and a series of its in vitro passaged strains
... the genomic diversity in this vaccine strain, resulting in the discovery of many previously unknown coding differences between Bartha and PRV virulent strains ...
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Comparative genomic analyses of Entamoeba species
... ! Having! identified! the! reads! most! likely! to! be! derived! from! the! E.# bangladeshi! genome,!I!wished!to!identify!the!genome!assembler!that!generated!the!‘best’!assembly! from! uncontaminated! read! libraries.! ...
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Integrated genomic analyses of ovarian carcinoma.pdf
... Author Contributions The TCGA research network contributed collectively to this study. Biospecimens were provided by the tissue source sites and processed by the biospecimen core resource. Data generation and ...
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Genomic analyses based on pulmonary adenocarcinoma in situ reveal early lung cancer signature
... AIS: Adenocarcinoma in situ; ANNs: Artificial neural networks; AUROC: Average area under an ROC curve; BLACAT1: Bladder Cancer Associated Transcript 1; CVAA: Cross-Value Association Anal[r] ...
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Genomic and transcriptomic analyses of jeotgalibacillus malaysiensis to provide insights inti its osmotic adaption
... Marine environment also contains abundance of halophilic and halotolerant microorganisms. For these microorganisms, salinity and osmotic stress tolerance are prerequisites for survival. Marine bacteria become attractive ...
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Deregressing estimated breeding values and weighting information for genomic regression analyses
... Double counting of information from descendants Genetic evaluation of animal populations results in EBV that are a weighted function of the parent average EBV, any information on the individual, adjusted for fixed ...
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Paenibacillus odorifer, the Predominant Paenibacillus Species Isolated from Milk in the United States, Demonstrates Genetic and Phenotypic Conservation of Psychrotolerance but Clade-Associated Differences in Nitrogen Metabolic Pathways
... Bacterium-induced spoilage of fluid milk is increasingly recognized as a major challenge for the dairy industry (10, 20). Furthermore, the growing demand for extended shelf life (ESL) milk (12) imparts an additional ...
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Genomic sequencing and analyses of HearMNPV—a new Multinucleocapsid nucleopolyhedrovirus isolated from Helicoverpa armigera
... Comparative genomic analyses showed that overall gene content and arrangement in these four viruses were highly conserved, and they are considered variants of the same NPV species ...
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Viral forensic genomics reveals the relatedness of classic herpes simplex virus strains KOS, KOS63, and KOS79
... KOS79. Genomic analyses revealed that KOS63 closely resembled other recently sequenced isolates of KOS and was of Asian origin, but that KOS79 was a genetically unrelated strain that clustered in genetic ...
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Comparative Analyses of Nonpathogenic, Opportunistic, and Totally Pathogenic Mycobacteria Reveal Genomic and Biochemical Variabilities and Highlight the Survival Attributes of Mycobacterium tuberculosis
... comparative genomic and proteomic analyses of patho- genic and nonpathogenic mycobacterial species provided strong evidence suggesting that despite having identical rRNA genes (ex- cept for notable ...
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Analyses of Chloroplast Genomic and Morphological Evolutionomy of Yulania Subsect. Cylindricae (Magnoliaceae)
... PHS(17bp)=0.93 can be regarded as the generic boundary of Magnoliaceae. Based on the boundary, it can be concluded that Manglietia Blum., Pachylarnax Dandy, Manglietiastrum Law, Parakmeria Hu et Cheng, Houpoea N. H. Xia ...
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Identification of potential HIV restriction factors by combining evolutionary genomic signatures with functional analyses
... human-flattened genomic alignments by using exon coordinates from the human Consensus Coding Sequence (CCDS) transcript, or if no CCDS transcript was available, the longest human protein-coding tran- script, to ...
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