High throughput genotyping
High-Throughput Genotyping Analyses and Image-based Phenotyping in Sorghum bicolor
... improve high-throughput genotyping and phenotyping in agricultural ...the genotyping of individuals from sequence data, crop improvement is currently limited predom- inately by phenotyping ...
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Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping
... essential in some circumstances, often a less invasive pro- cedure is sufficient and would improve trial recruitment. The potential advantages of saliva sample collection com- pared with blood sample collection include ...
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High-throughput genotyping of wheat-barley amphiploids utilising diversity array technology (DArT)
... a high-throughput genotyping technology in ...ing high quality markers that can be exploited in a range of molecular breeding and genomics applications in ...
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Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping
... buccal cyto-brushes [1-7]. The main reasons for this are concerns over reduced yield and quality of DNA extracted from saliva, especially given the rigorous DNA requirements for high-throughput ...
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High Throughput Genotyping of Single Nucleotide Polymorphisms in the Plasmodium falciparum dhfr Gene by Asymmetric PCR and Melt Curve Analysis
... dissociate from the DNA template at a lower temperature compared to that of a perfectly matched sequence. The reso- lution of different SNPs is achieved by analyzing the melt-curve profiles for the probe-amplicon ...
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High Throughput Genotyping of Salmonella enterica Serovar Typhi Allowing Geographical Assignment of Haplotypes and Pathotypes within an Urban District of Jakarta, Indonesia
... 2008 High-throughput epidemiological typing systems that provide phylogenetic and genotypic information are beneficial for tracking bacterial pathogens in the ...is high and is associated with ...
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High-Throughput Genotyping of CRISPR/Cas Edited Cells in 96-Well Plates
... for high-throughput screening of large numbers of clones are still ...into high-throughput pipelines; this is especially complex in polyploid cells with more than two ...
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MGIS: Managing banana (Musa spp.) genetic resources information and high-throughput genotyping data
... produce high- density genetic markers for a large number of samples at low ...publications, genotyping studies and associated genotyping datasets report- ing on germplasm ...
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A Magnetic Bead-Based DNA Extraction Protocol Suitable for High-Throughput Genotyping in Shrimp Breeding Programs
... recovering high purity DNA from shrimp muscle tissue were wash buffers employing ethanol rather than isopropanol and identifying commercially-available magnetic bead types that would recover DNA at high ...
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Automated High Throughput Genotyping for Study of Global Epidemiology of Mycobacterium tuberculosis Based on Mycobacterial Interspersed Repetitive Units
... The last observation supports the assumption that the com- bined molecular clock of the 12 MIRU-VNTR loci runs slightly slower than that of IS6110 RFLP. It may be useful to note that, like multilocus enzyme ...
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High, clustered, nucleotide diversity in the genome of Anopheles gambiae revealed through pooled-template sequencing: implications for high-throughput genotyping protocols
... Sequence traces were aligned with CodonCode Aligner (CodonCode Corporation, Dedham, MA.) Traces, or por- tions thereof, with low Phred quality scores were automat- ically discarded. Nucleotide positions exhibiting ...
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Saliva samples as a source of DNA for high throughput genotyping: an acceptable and sufficient means in improvement of risk estimation throughout mammographic diagnostics
... TP53 [10–13]. Several intermediate penetrance genes (CHEK2, ATM, PALB2, and RAD50) are responsible for about 5% of cases [14–21]. Nonetheless, BC heritability and tumor development based on a genetic defect seem to be ...
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Use of an Automated Multiple Locus, Variable Number Tandem Repeat Based Method for Rapid and High Throughput Genotyping of Staphylococcus aureus Isolates
... reliable genotyping methods that allow real-time epidemiological surveillance would be instru- mental to monitoring of the spread of methicillin-resistant Staphylococcus ...rapid genotyping of ...
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High throughput real time PCR based genotyping without DNA purification
... for high-throughput genotyping without DNA extraction will continue to be investigated by our ...correctly genotyping samples, with the hope that eventually this methodology will be used to ...
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Medium-throughput SNP genotyping and linkage mapping in Haliotis midae
... for genotyping with the GoldenGate assay (primer binding may be affected), it is however also important to adhere to this ...to high-throughput genotyping methods that do not require as large ...
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High throughput SNP discovery and genotyping in grapevine (Vitis vinifera L.) by combining a re-sequencing approach and SNPlex technology
... for high throughput genotyping technologies such as ...this genotyping technology in grapevine we have validated the selected SNPs as molecu- lar markers for genetic diversity, cultivar ...
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Novel DNA Chip Based on a Modified DigiTag2 Assay for High Throughput Species Identification and Genotyping of Mycobacterium tuberculosis Complex Isolates
... multipurpose high-throughput genotyping tool for the assessment of recent epidemiological data and evolutional pattern in Mycobacterium tuberculosis complex (MTBC) clinical isolates was developed in ...
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High-Throughput, Large-Scale SNP Genotyping: Bioinformatics Considerations
... large genotyping facility that shares at least parts of the technologies and strategies employed at the ...national genotyping facility, will be a valuable resource to any group wishing to undertake a ...
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High-Throughput High-Resolution Class I HLA Genotyping in East Africa.
... sufficient throughput for large immunoepidemiological ...between high resolution and high ...of genotyping tools with this capacity will be extremely useful in the identification of correlates ...
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High Resolution Genotyping of Campylobacter Species by Use of PCR and High Throughput Mass Spectrometry
... RESULTS MLST strain typing on the T5000 platform and clonal com- plex association for primer selection. The assay for Campy- lobacter on the T5000 platform incorporates two primer pairs that unambiguously distinguish C. ...
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