IDENTIFICATION AND TYPING METHODS OF
Molecular Methods for Bacterial Strain Typing
... bacterial typing techniques is used that are different from one another in the aspects of study objectives, costs, reliability and discriminatory ...the typing methods can achieve all desired ...
7
Review on Molecular Typing Methods of Pathogens
... Ribotyping is a method that can identify and classify bacteria based upon differences in rRNA (16S and 23S rRNA). DNA is extracted from a colony of bacteria and then restricted into discrete-sized fragments. The DNA is ...
7
Diagnostic and typing methods for investigating Legionella infection
... European data indicate that Legionella infections were diagnosed by culture in only 10% of cases. 8 A rational approach to diagnosis A rational approach to diagnosis is required because of the difficulty in ...
5
Evaluation of Whole Genome Sequencing for Identification and Typing of Vibrio cholerae
... smi-b-30-investigation-of-faecal-specimens-for-enteric-pathogens). Consequently, the true incidence of domestically acquired V. cholerae infection in the United Kingdom is unknown, and almost all isolates of enteric ...
8
Molecular Identification and Typing of Enteroviruses Isolated from Clinical Specimens
... the typing methods ...EV typing, except where EV infec- tious diseases are suspected to be vaccine associated, in which case compliance with the World Health Organization schedule is ...the ...
7
Towards a General Model of Answer Typing: Question Focus Identification
... answer typing system that employs an explicit set of answer types such as [3] may exploit the enriched question focus ...the identification of multiple question focus instances may also benefit approaches ...
12
Human skeletal remains: development of DNA extraction and typing methods
... for identification of missing persons or unknown remains found in different circumstances such as mass disasters, wars or socio-political events and to solve paternity ...
72
Molecular-Genetic Approaches for Identification and Typing of Pathogenic Candida Yeasts: A Review
... III METHODS FOR IDENTIFICATION OF CANDIDA SPECIES A) Non-DNA-Based Typing Methods: ...isoenzyme typing characterizes enzymatic proteins and assesses their polymorphism by analysing ...
13
Comparison of three typing methods for clinical and environmental isolates of Aspergillus fumigatus
... rapid typing system for this fungus. Typing of clinical and environmental isolates could help to provide the answer to several medically relevant prob- lems, such as pinpointing the environmental sources of ...
6
Strategies for differentiation, identification and typing of medically important species of mycobacteria by molecular methods
... spoligo- typing was used to type ...four methods, 28 types were distinguished. For expediency and adequate typing capabilities, the authors recommend the combi- nation ...
20
Direct identification and typing of Mycobacterium tuberculosis by PCR
... published methods show merit, nearly all pose practical problems in that they require multiple steps and most require Southern blotting, hybridization, and probe detection to identify the PCR ...strain-specific ...
6
Advances in Laboratory Methods for Detection and Typing of Norovirus
... Recent advances in nucleic acid sequencing technologies, such as “next-generation” sequencing (NGS), have opened new per- spectives for research and diagnostic applications because of the high speed and throughput of ...
9
Exact Molecular Typing of Aspergillus fumigatus. Methods and Applications.
... Verification of the repeat number in each construct was performed by direct sequence analysis of the plasmid DNA preparations as described before 5 . A mixture of plasmid DNA preparations was made containing inserts with ...
206
Microsatellite Typing as a New Tool for Identification of Saccharomyces cerevisiae Strains
... molecular methods, data on S. cerevisiae typing are still ...these methods, such as karyotyping or mitochon- drial DNA polymorphism, are incompletely evaluated because of the low number of strains ...
9
Development and identification of petrophysical rock typing for effective reservoir characterization
... rock typing that aims to derive representative model equations for static ...these methods of clustering the similarities still face hurdles due to complexities in pore- space conditions and reservoir ...
25
Principles and Applications of Methods for DNA Based Typing of Microbial Organisms
... sequences of HIV clade B proteases of 167 HIV isolates taken from 102 patients in order to identify mutations associated with resistance to protease inhibitors. More recently, Troesch et al. (77) have described the use ...
9
Current Methods in the Molecular Typing of Mycobacterium tuberculosis and Other Mycobacteria.
... the identification of 17 MTBC phylogenetic lineages with high ...SNP typing approach is highly specific and sensitive, although SNP analysis has predominantly been used in genealogy, phylogenetic, and ...
23
16S Ribosomal DNA Typing for Identification of Pathogens in Patients with Bacterial Keratitis
... the methods used in that clinical setting, including, for some patients, Sabouraud’s or nonnutrient agar with Escherichia coli overlay or calcofour white or acid-fast ...
5
Identification and Characterization of Variable Number Tandem Repeat Markers for Typing of Brucella spp
... work when used in conjunction with the shorter and apparently more variable repeats. Again, representatives of a number of allelic states were sequenced. Only two alternative allelic states were detected for VNTRs 14, ...
12
SNIT: SNP identification for strain typing
... The efficiency of the SNIT pipeline stems from the use of pairwise alignments based on exact matches. However, this approach limits the application of the pipeline to bacterial and eukaryotic genomes. Due to the high ...
5