Molecular subtyping
Molecular Subtyping Methods for Detection of Salmonella enterica Serovar Oranienburg Outbreaks
... different molecular subtyping methods using human salmonellosis-associated Salmonella serovars and their applicability in detection of serovar Oranienburg in an ...
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An Aptamer-Based Probe for Molecular Subtyping of Breast Cancer
... differentiate among cancer cells of various molecular subtypes due to the lack of specificity. For example, Gijs et al. [43] developed two novel DNA aptamers targeting the HER2 receptor using an adherent ...
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Molecular subtyping of nasopharyngeal carcinoma (NPC) and a microRNA-based prognostic model for distant metastasis
... In the era of precision oncology, molecular subtyping of NPC is important. Not only it can stratify patients into different subgroups, but also may help in triaging treatment strategies for the patients in ...
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Use of Molecular Subtyping To Document Long Term Persistence of Corynebacterium diphtheriae in South Dakota
... Four molecular subtyping methods—ribotyping, multilocus en- zyme electrophoresis (MEE), random amplified polymorphic DNA (RAPD), and single-strand conformation poly- morphism—were used to molecularly ...
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Molecular Subtyping and Characterization of Bovine and Human Streptococcus agalactiae Isolates
... by molecular subtyping and phenotypic methods to probe the interspecies transmission potential of this ...all subtyping data allowed the differentiation of 39 clonal groups; 26 groups contained only ...
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Molecular Subtyping of Human Rhinovirus in Children from Three Sub Saharan African Countries
... HRV molecular subtyping results obtained during severe and asymptomatic childhood infec- ...of molecular subtyping of the HRV species prevalence among cases (for HRV-A, 48%; for HRV-B, 7%; for ...
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Gene expression molecular subtyping of triple negative breast cancer tumours: importance of immune response
... deciphering molecular pres- entation of this disease to identify subgroups of patients with clinical significance, such as prognosis or response to therapy, in order to optimize patient ...TN subtyping and ...
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High Level of Sequence Diversity in the 16S rRNA Genes of Haemophilus influenzae Isolates Is Useful for Molecular Subtyping
... for molecular characterization of bacterial patho- gens are commonly used to establish genetic relatedness or similarities between individual strains, which is useful for un- derstanding disease transmission, ...
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Molecular Subtyping of Clostridium perfringens by Pulsed Field Gel Electrophoresis To Facilitate Food Borne Disease Outbreak Investigations
... Clostridium perfringens is a common cause of food-borne illness. The illness is characterized by profuse diarrhea and acute abdominal pain. Since the illness is usually self-limiting, many cases are undiagnosed and/or ...
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Research Note: Molecular Subtyping of Salmonella enterica serovar Tshiongwe Recently Isolated in Malaysia During 2001 2002
... Abstract. Pulsed field gel electrophoresis (PFGE) and antimicrobial susceptibility analysis were un- dertaken on twenty-three strains of Salmonella enterica serovar Tshiongwe, an unusual serovar, which recently emerged ...
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Molecular subtyping scheme for serotypes HS1 and HS4 of Campylobacter jejuni
... a molecular subtyping scheme for two principal O (heat-stable [HS]) serotypes of Campylobacter jejuni, HS1 and the HS4 ...genotypic subtyping scheme for these common subspecific phenotypes of ...
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Molecular Subtyping of Treponema pallidum during a Local Syphilis Epidemic in Men Who Have Sex with Men in Melbourne, Australia
... Molecular subtyping of T. pallidum from clinical samples. Samples that tested positive for the polA gene of T. pallidum were retrospectively subtyped using the method described by Pillay et al. (14). As ...
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Molecular subtyping for clinically defined breast cancer subgroups
... accurate molecular subtyping, we present an alter- native approach to gene centering that incorporates a routine data transformation step prior to ...inaccurate molecular subtype classifications when ...
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Sequence Diversity of Neisseria meningitidis 16S rRNA Genes and Use of 16S rRNA Gene Sequencing as a Molecular Subtyping Tool
... We investigated the diversity of the primary sequences of 16S rRNA genes among Neisseria meningitidis strains (Men) and evaluated the use of this approach as a molecular subtyping tool. We aligned and ...
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Molecular subtyping of Salmonella enteritidis phage type 8 strains from the United States
... These findings demonstrate that ribotyping with AccI and SmaI provides an additional means of discriminating between some phage type 8 strains; however, ribotyping and the phage 2 hybrid[r] ...
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Molecular subtyping of prevalent M serotypes of Streptococcus pyogenes causing invasive disease
... Macrorestriction and PFGE. Streptococci were grown overnight on blood agar plates at 37 8 C, and the cells were resuspended in 2 ml of solution I (1 M NaCl, 10 mM Tris-HCl [pH 7.6]) to a density equivalent to that of a ...
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Molecular subtyping of DCIS : heterogeneity of breast cancer reflected in pre invasive disease
... Molecular profiling by gene array and its translation into surrogate immunohistochemistry profiles is likely to have a major impact on breast cancer classification and management, and it is important that similar ...
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Molecular subtyping scheme for Salmonella panama
... We describe a genotyping scheme for Salmonella panama. Defined probes specific for the 16S rRNA gene and the DNA insertion element IS200 were generated by PCR from S. panama and were used to probe genomic Southern blots ...
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Detection, Isolation, and Molecular Subtyping of Escherichia coli O157:H7 and Campylobacter jejuni Associated with a Large Waterborne Outbreak
... The PCR is a rapid and reliable tool for the molecular-based diagnosis of a variety of infectious diseases (14). PCR analysis for screening drinking water and environmental samples has been reported (46–48) and ...
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Molecular Subtyping of Poultry Associated Type A Clostridium perfringens Isolates by Repetitive Element PCR
... PCR subtyping of ...taker Molecular Applications) gels (25 cm by 25 cm; Bio-Rad Sub Cell model 192 with buffer recirculation) prepared in running buffer (1⫻ Tris-acetate-EDTA buffer) containing ...
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