protein abundance
On protein abundance distributions in complex mixtures
... of protein distribution do not adequately fit the experimental data, with empirical evi- dence pointing toward a more complicated mixing ...that protein abundances as reflected in the number of peptides ...
9
Introns Regulate RNA and Protein Abundance in Yeast
... protein abundance, and fitness (D eutschbauer et ...of protein production (D eutschbauer et ...modulate protein expression and affect fitness, we asked if introns predominate in genes known to ...
8
Circadian and Circatidal Rhythms of Protein Abundance in the Intertidal Mussel Mytilus californianus
... of food, Mytilus oxygen consumption rates rapidly increase to accommodate the feeding activity and this metabolic rate remains elevated even after the removal of food in order to process the nutrients (Riisgård et al., ...
152
Proteogenomic analysis of psoriasis reveals discordant and concordant changes in mRNA and protein abundance
... Ribosomal protein accumulation may ultimately con- tribute to heightened translation by augmenting the quantity of protein generated per mRNA molecule in lesional skin, with global effects favoring ...
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A Mobile Functional Region of Kaposi's Sarcoma-Associated Herpesvirus ORF50 Protein Independently Regulates DNA Binding and Protein Abundance
... ORF50 protein interacting with RBPJK ...the abundance of ORF50 protein and mutations that enhance DNA binding by ORF50 protein both reduce the capacity of the protein to activate direct ...
17
Joint learning improves protein abundance prediction in cancers
... complex protein functional networks and pathways, our understanding of protein ex- pression regulation has been revolutionized over the past 60 ...predicting protein abundance from ...
14
Proteomic analysis of cardiac response to thermal acclimation in the eurythermal goby fish Gillichthys mirabilis
... cardiac protein abundance in response to temperature acclimation (transfer from 13°C to 9, 19 and 26°C) in a eurythermal goby, Gillichthys ...kinase abundance increased in 9°C-acclimated fish, ...
14
Impact of combined acidic and hyperosmotic shock conditions on the proteome of Listeria monocytogenes ATCC 19115 in a time course study
... of protein abundance changes is larger in these cells than the inacti- vated cell population is ...The protein abundance responses are relatively muted (usually less than 3-4-fold) which could ...
13
Differential chromatin proteomics of the MMS-induced DNA damage response in yeast
... spots. Protein spots were quantified using peak volumes calculated by the DeCyder™ ...chromatin abundance/ WCE) when chromatin abundance exceeded WCE abun- dance for the target protein, and as ...
14
Parallel deep transcriptome and proteome analysis of zebrafish larvae
... mRNA abundance assayed by mRNA-seq versus protein abundance in Figure 3B we can see that many genes that do not correlate in expres- sion levels belong to three well known gene categories: ribosomal ...
8
Casein kinase 1α–dependent feedback loop controls autophagy in RAS driven cancers
... upregulated protein abundance of FOXO3A, LC3B-II, and p62 in T24 and HCT-116 cells (Figure 8A), indicative of blockade of effective autophagy in these ...
19
Engineering Corynebacterium glutamicum to produce the biogasoline isopentenol from plant biomass hydrolysates
... same protein were summed together to assign the protein abundance of a given ...average protein value is shown from samples in biological triplicate to assess different timepoints and growth ...
15
AKT3 promotes prostate cancer proliferation cells through regulation of Akt, B-Raf & TSC1/TSC2
... However, protein is the actual players involved in most biological ...AKT3 protein level is approximately two fold higher in primary prostate tumors as compared to nearby non- malignant prostate ...the ...
16
Intra mammary molecular mechanisms involved in the response to changes in milking frequency : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Animal Science at Massey University, Palmerston North, New Zealand
... P) protein abundance and αS1- casein (CSN1S1) mRNA abundance, STAT5-P protein abundance and β1-integrin protein abundance, STAT5-P protein abundance and ...
18
Mechanisms of colour adaptation in the prawn Penaeus monodon
... the abundance of the colour protein CRCN as a result of exposure to a black or white ...CRCN protein abundance are consistent with the measured difference in free astaxanthin from the soluble ...
8
Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life
... Intriguingly, gut communities associated with infant 03 exhibit high levels of lipolytic fermentation at early time points and shifted towards dominant proteolytic fermentation over time. The availability of genome ...
13
Glucocorticoids enhance acid activation of the Na+/H+ exchanger 3 (NHE3)
... Glucocorticoids increase proximal tubule apical mem- brane Na/H antiporter activity in vivo and in cell culture (5, 9, 17). The present studies also demonstrate that gluco- corticoids increase NHE3 protein ...
8
BEL Networks Derived from Qualitative Translations of BioNLP Shared Task Annotations
... Activity status like gtp(p(protein)), kin (p(protein)), tscript(p(protein)), cat(p(protein)), phos(p(protein)) are often found in the BEL ex- ample corpus. This information might be ...
9
Biomarkers in human amniotic fluid: a various proteomics approach
... extensive protein profile by analyzing the 16 AF samples between gestation ages of 16 th - 18 th weeks from women carrying chromosomally normal ...2D protein database of the normal human AF supernatant ...
13
Human Cytomegalovirus Induces the Activity and Expression of Acetyl-Coenzyme A Carboxylase, a Fatty Acid Biosynthetic Enzyme Whose Inhibition Attenuates Viral Replication
... sion of a downstream viral gene(s) is required for increased ACC1 levels. Additionally, we find that viral DNA replication is not necessary for increased ACC1 levels, suggesting that true late gene expression is not ...
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