RIL genotyping and linkage map construction
Filling gaps with construction of a genetic linkage map in tetraploid roses
... genetic linkage map for tetraploid roses that was constructed from an F 1 segregation population using AFLPs and SSRs on 189 ...32 linkage groups, ...integrated linkage map was composed ...
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Genome-wide SNP discovery and genetic linkage map construction in sunflower (Helianthus annuus L.) using a genotyping by sequencing (GBS) approach
... GBS data analysis and SNP identification A total of 46,278 SNP loci were discovered in the sunflower genome based on the locations of the unique alignment of merged tags (353,304) in the genome which contained 17 ...
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Construction of a preliminary genetic linkage map of yerba mate (Ilex paraguariensis)
... values. Linkage analyses were carried out by using Joinmap ...female map including 11 linkage groups and a male one with 16 linkage ...the construction of a preliminary genetic ...
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Construction of a Genetic Linkage Map in Tetraploid Species Using Molecular Markers
... into linkage groups using cluster analysis; maximum-likelihood estimation of the phase, recombination frequency, and LOD score for all pairs of markers in the same linkage group using the EM algorithm; ...
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Linkage Map Construction and QTL Analysis of Agronomic and Fiber Quality Traits in
... detected for lint percentage, plant height, micronaire, fiber elongation, and 50%-span length at an experiment-wise type-I error rate of 5%, which are also highly heritable traits. A number of factors are likely ...
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Construction of a Molecular Linkage Map of Pearl Millet Using SSR Markers
... a linkage map of the pearl millet mapping population of 295 Recombinant Inbred Population based on the cross 81B-P13 × AIMP ...skeleton linkage map of seven linkage groups with a total ...
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Genetic Linkage Map Construction in Pearl Millet Using SSR Markers
... consensus map developed by Rajaram et al 18 , using four F 7 recombinant inbred populations (RIP) based on crosses ICMB 841-P3 × 863B-P2 (RIP A), H 77/833-2 × PRLT 2/89-33 (RIP B), 81B-P6 × ICMP 451-P8 (RIP C) and ...
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Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley
... for map construction using JoinMap ...integrated map was computed for the male and female parents using the combined group for map inte- gration function in the MergeMap ...maps. ...
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Development of a High-Density Linkage Map and Tagging Leaf Spot Resistance in Pearl Millet Using Genotyping-by-Sequencing Markers
... traits. Genotyping-by- sequencing (GBS) markers can be used to build high-density linkage maps, even in species lacking a reference ...genetic map developed using 150 RILs contained 16,650 ...
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A Comprehensive Linkage Map of the Dog Genome
... afforded an abundance of putative markers that could be computationally mined from a physical framework and selected for even spacing and complete coverage. These markers performed well, and their standardized design ...
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Construction and Annotation of a High Density SNP Linkage Map of the Atlantic Salmon (Salmo salar) Genome
... A linkage map comprising ...SNP linkage map for any salmonid species. Alignment of the linkage and physical maps revealed good agreement between genetic map, and the mapping ...
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Construction of genetic linkage map and QTL analysis of sinksize traits in pearl millet (Pennisetum glaucum)
... The linkage map constructed primarily using SSCP-SNP markers is the first to be reported for pearl ...genetic map will prove useful in locating and manipulating genes of interest and in selection of ...
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Construction of microsatellite linkage map and detection of segregation distortion in indica rice (oryza sativa l.)
... molecular linkage map is a prerequisite to identify the quantitative traits ...loci. Construction of linkage maps, using mapping populations derived from two major subspecies: indica and ...
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Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array
... M432 linkage map for the purposes of can- didate gene identification and marker development follow- ing QTL ...SNP-based linkage map produced against the previously-published SSR-based ...
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Genotyping-by-Sequencing Derived High-Density Linkage Map and its Application to QTL Mapping of Flag Leaf Traits in Bread Wheat
... high-density linkage map based on SNPs generated through GBS in recombinant inbred lines (RILs) of bread wheat derived from cross between highly contrasting par- ents Harry (drought tolerant hard red winter ...
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Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array
... M432 linkage map (20%) is a result of a combination of factors, including detection of paralogous loci generated through whole genome duplication and CNV, and the mis-assignation of genotypes scored in ...
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Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array
... Linkage mapping was performed with all SNP data and the SSR data of Fernández- Fernández et al. [9]. Data for SSR markers with parental genotypes AØ × AØ (and thus segregating in a 3:1 Mendelian ratio) were not ...
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Pearl millet [Pennisetum glaucum (L.) R. Br.] consensus linkage map constructed using four RIL mapping populations and newly developed EST-SSRs
... millet linkage groups Pg_1, Pg_2, Pg_3, Pg_4, Pg_5, Pg_6, Pg_7 and Pg_A have 21/29 (21 out of 29), 17/30, 6/11, 9/17, 9/22, 16/32, 10/27 and 1/2 marker loci, respectively, that show likely syntenic relationships ...
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Medium-throughput SNP genotyping and linkage mapping in Haliotis midae
... INT map and FamDS1 and taking into consideration number of markers mapped) as it has been shown that a genetic map may be inflated by low marker density (Yu & Guo ...for linkage map ...
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Construction of an ultrahigh-density genetic linkage map for Jatropha curcas L. and identification of QTL for fruit yield
... genetic linkage map, containing 3422 SNP and indel markers. This linkage map can provide bet- ter marker–trait associations in future studies because of its high map ...age map, ...
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