Small subunit ribosomal RNA
Rates and patterns of base change in the small subunit ribosomal RNA gene.
... However, only a small portion of the bases in srDNA take part in loop and bulge structures (APPENDIX A, Figure 4). Overall, with the bases classed as structur- ally unkno[r] ...
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Natural infection of the sand fly Phlebotomus kazeruni by Trypanosoma species in Pakistan
... and small subunit ribosomal RNA (SSU rRNA) genes were also amplified from the parasite using gGAPDH (G3: TTYGCCGYATYGGYCGCATGG and G5: ACMAGRTCCACCACRCGGTG) and SSU rRNA- specific primers ...
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Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia)
... large subunit ribosomal RNA gene; 18S: small subunit ribosomal RNA gene; ABGD: Automatic Barcode Gap Discovery (species delimitation algorithm); BI: Bayesian inference ...
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Comparison of techniques for DNA extraction and agarose gel staining of DNA fragments using samples of Cryptosporidium
... (small subunit ribosomal RNA), and the GP60 (60 kDa glycoprotein) genes, and two types of DNA staining reagents, ethidium bromide and GelRed TM ...
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Ribosomal small subunit sequence diversity of Scutellospora within single spores and roots of bluebell from a woodland community.
... The region sequenced in this study represents one of the more conserved areas of the SSU. The VANS1 primer (Simon et al. 1992a) was initially designed from sequences of Gigaspora margarita Becker and Hall DAOM 194757 (G. ...
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The composition and abundance of bacterial communities residing in the gut of Glossina palpalis palpalis captured in two sites of southern Cameroon
... In conclusion, this study provides new evidence that Wig- glesworthia, the obligatory primary symbiont of tsetse flies, is the predominant genus within the tsetse fly intes- tinal flora. No significant differences were ...
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Ltv1 Is Required for Efficient Nuclear Export of the Ribosomal Small Subunit in Saccharomyces cerevisiae
... .70 ribosomal proteins into two ...include RNA exo- and endonu- cleases, RNA-modification enzymes, helicases, and ex- port factors, as well as a large number of proteins whose functions are as yet ...
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LOCALIZATION IN THE TOMATO GENOME OF DNA RESTRICTION FRAGMENTS CONTAINING SEQUENCES HOMOLOGOUS TO THE rRNA (45S), THE MAJOR CHLOROPHYLL a/b BINDING POLYPEPTIDE AND THE RIBULOSE BISPHOSPHATE CARBOXYLASE GENES
... DNA restriction fragments containing sequences homologous to the ribosomal RNA (45s), the major chlorophyll a/b binding polypeptide (CAB) and the small subunit of ribulose bis[r] ...
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Inhibition of cytoplasmic and organellar protein synthesis in Toxoplasma gondii Implications for the target of macrolide antibiotics
... large subunit of the parasite's ribosomal RNA predict that the cytoplasmic ribosomes of ...a small subset of parasite proteins likely to be synthesized on mitochondrial ...clindamycin. ...
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Representation, searching and discovery of patterns of bases in complex RNA structures
... ‘small RNA’ set it was possible to identify the expected locations of examples of the base pairs in many cases by examination of the sequence, secondary structure and visual ...30S small ...
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The mitochondrial transcriptome of the anglerfish Lophius piscatorius
... mitochondrial small- and large-subunit ribosomal RNA; ND1–6, NADH dehydrogenase subunit 1 to 6; COI-III, cytochrome oxidase subunit I to III; A6 and A8, ATPase subunit 6 ...
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The RNA World: A Look at Ribonuclease P RNA, Small Nucleolar RNA, 6S RNA, and the Small Ribosomal Subunit
... Figure 1: Microflora of baseline and coldstressed manatees The microflora of baseline and coldstressed sampled for the proximal, mid, and distal large intestine of each animal. Micro[r] ...
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The small ribosomal subunit RNA isoforms in Plasmodium cynomolgi.
... As in other Plasmodium species, these genes are present in low copy number, are unlinked and form two types that are distinct in sequence and are expressed stage specifi[r] ...
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Mechanisms of translational initiation and elongation in mammalian mitochondria
... 30S ribosomal subunit and promotes the joining of the 30S and 50S ribosomal subunits ...the small ribosomal subunit, (2) promoting the formation of initiation complexes, (3) ...
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Genome-Wide Analysis of RNA Secondary Structure in Eukaryotes
... input RNA, extent of RNase treatment, ...varied RNA population likely results in a broader range of enzyme ...the RNA pool at a dilute concentration so as to avoid heteroduplex ...the RNA ...
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Isolation And Identification Of Endophytic Fungi Rhizopus Delemar From Memecylon Umbellatum In Gudiyum Forest, Tamil Nadu, India
... MemecylonumbellatumBurm. (Family: Melastomataceae) is small evergreen shrub or tree having young terete branches and bears numerous umbellate cymes. In English the plant is known as “Ironwood tree” while in ...
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Pleurostomophora ochracea, a Novel Agent of Human Eumycetoma with Yellow Grains
... The ribosomal DNA (rDNA) in- ternal transcribed spacer (ITS) gene and partial sequences of the actin (ACT1),  -tubulin (BT2), and elongation factor 1 ␣ (TEF1) genes, as well as the 18S rDNA gene (small ...
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Characterization of a 7-kilodalton subunit of vaccinia virus DNA-dependent RNA polymerase with structural similarities to the smallest subunit of eukaryotic RNA polymerase II.
... Evidence that the small polypeptide is a bona fide RNA polymerase subunit was based on the following observations: i the 7-kDa polypeptide was associated with virionassociated RNA polyme[r] ...
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The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes
... BiPON currently contains a rather exhaustive descrip- tion of the bacterial gene expression (including mecha- nisms of regulation), i.e. transcription, RNA processing and decay, ribosome biogenesis, tRNA ...
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A mutation in the large subunit ribosomal RNA gene of Tetrahymena confers anisomycin resistance and cold sensitivity.
... In relation to this, it is of interest to note that a mutation in the peptidyl transfer center of the large subunit rRNA gene that confers erythromycin resistance [r] ...
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