Soil microbiome
Significant Impacts of Increasing Aridity on the Arid Soil Microbiome
... of soil organic carbon (SOC) reserves (3, 11, 12), and their continued degradation and loss of productivity (13) in response to megadroughts, global warming, and anthropogenic activities have con- tributed to a ...
15
Resilience of the resident soil microbiome to organic and inorganic amendment disturbances and to temporary bacterial invasion
... native soil microbiome after (i) multiple pulse disturbances caused by the application of organic vinasse residue, inorganic nitro- gen, or both throughout the sugarcane crop-growing sea- son ...inhabiting ...
12
The soil microbiome at the Gi FACE experiment responds to a moisture gradient but not to CO2 enrichment
... in soil bacterial community composition and indicate that the soil functional responses to CO2 enrichment previously reported at Gi-FACE are due to factors other than changes in bacterial community ...and ...
38
Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations
... the soil microbial community composition profiles, gene expression patterns, and metabolites shifted upon drying across all soil locations, we observed minor differences between wet and control ...the ...
16
Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming
... and soil compartments could explain the differential responses of soil and root micro- biomes to the cropping ...the soil microbiome would exhibit the most pronounced differences in response ...
14
The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome
... Additional file 1: Figure S1. Summary of sampling in this study. The sampling field (34.248727°N, 119.816724°E, 22.9 m a.s.l.) was located in Jiaozhou City in Shandong Province, China. Figure S2. Significantly (P < ...
18
The Soil Microbiome Influences Grapevine Associated Microbiota
... bulk soil) than aboveground (leaves, flowers, and grapes) samples, as described for other plant systems (28, ...in soil, may play an essential role in plant development and physiology, as brassinosteroids ...
10
Pathogen invasion indirectly changes the composition of soil microbiome via shifts in root exudation profile
... Together these results suggest that pathogen invasion can 256 activate plant defences that inhibit pathogen growth directly and change the composition of soil 257 microbiome indirectly v[r] ...
30
Unravelling the effects of tropical land use conversion on the soil microbiome
... entire soil microbial com- munity composition showed a gradient along the four dif- ferent tested land use systems corresponding to increasing land use intensity (rainforest < jungle rubber < rubber ...
18
Challenges and approaches in microbiome research : from fundamental to applied
... decade, microbiome research has modified our perception on the complexity and structure of microbial ...human microbiome, the complexity of microbial interactions and the importance of analyzing them ...
12
Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome
... lung microbiome, we assessed the viability of these dispersed microbes using standard cultivation techniques from BAL ...lung microbiome on the host is yet to be delineated, we show that a large proportion ...
9
Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics
... (e.g., soil type, topography, human-driven agricultural practices) and neutral ...Vineyard soil mi- crobiota demonstrate similar regional distribution patterns, asso- ciated instead with edaphic factors ...
12
<p>Signatures of Mucosal Microbiome in Oral Squamous Cell Carcinoma Identified Using a Random Forest Model</p>
... oral microbiome associated with OSCC have been explored by comparing OSCC patients with healthy controls, or by comparing tumor sites with the surrounding normal ...oral microbiome in OSCC. 8 – 10 Many ...
11
Dysbiosis of lower respiratory tract microbiome are associated with inflammation and microbial function variety
... ing microbiome dysbiosis or chronic inflammation in ...how microbiome of the lower respiratory tract interacted with host lung, many animal models have been ...established microbiome dysbiosis mouse ...
16
Laboratory colonization stabilizes the naturally dynamic microbiome composition of field collected Dermacentor andersoni ticks
... scale microbiome ana- lysis, as we believe that to effect change we will need to work at the population level rather than at the level of the ...simplistic microbiome than other ...
10
Frequent Replenishment Sustains the Beneficial Microbiome of Drosophila melanogaster
... melanogaster microbiome depend on ingestion of ...the microbiome in newly emerged flies and reduced the predominant members, Acetobacter and Lactobacillus ...normal microbiome were less susceptible ...
8
Speciation by Symbiosis: the Microbiome and Behavior
... Over the past decade, biology has stood vis-a-vis with what Carl Woese referred to as the “sleeping giant” of biology—the micro- bial world (1). During this period of groundbreaking research, a new vision for the ...
11
Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome
... yielded 187 studies. We identified 10 additional studies that were not designed to explicitly test for an association between the mi- crobiome and obesity. We then manually curated the 197 studies to select those that ...
9
Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome
... The use of 16S data together with proteomics provided us with greater resolution of functional roles of members of the gut microbiome. There was a high correlation between the 16S data and the proteome data with ...
16
Microbiome Data Distinguish Patients with Clostridium difficile Infection and Non C difficile Associated Diarrhea from Healthy Controls
... Current microbiome-related studies use three general meth- ods to characterize differences in the microbiomes between groups of ...the microbiome to identify microbiome signatures of psoriasis; ...
9