Transcriptional profiling
Transcriptional profiling of Saccharomyces cerevisiae exposed to propolis
... Recently, we applied the power of Saccharomyces cere- visiae as a model organism for studies of genetics, cell biology, and genomics to determine how propolis affects eukaryotic cells at the cellular level [17]. Propolis ...
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In Vivo Transcriptional Profiling of Yersinia pestis Reveals a Novel Bacterial Mediator of Pulmonary Inflammation
... Transcriptional analysis of highly regulated Y. pestis genes dur- ing pulmonary infection. In 2005, Lathem et al. identified 410 Y. pestis open reading frames (ORFs) that were significantly up- or downregulated in ...
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Transcriptional Profiling of CD4 T Cells Identifies Distinct Subgroups of HIV-1 Elite Controllers
... whole-genome transcriptional profiling approach to characterize gene expression signatures of CD4 T cells from an unselected cohort of elite ...The transcriptional profiles for the majority of elite ...
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Characterization of mouse embryonic stem cell differentiation into the pancreatic lineage in vitro by transcriptional profiling, quantitative RT PCR and immunocytochemistry
... and transcriptional profiling we identified transcripts up-regulated in committed progenitor cells potentially involved in endoderm and pancreatic development and cell func- tion, but also in ...
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Transcriptional profiling of eosinophil subsets in interleukin 5 transgenic mice
... these transcriptional anal- yses available at haemosphere.org. Transcriptional profiling and in sil- ico approaches were used to reconstruct the eosinophil lineage (from common myeloid progenitors ...
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Transcriptional profiling of predator-induced phenotypic plasticity in Daphnia pulex
... Some of these families are represented by sev- eral candidate genes in our list of DE genes and among them a considerable number of families is significantly over-represented (Table 4). [r] ...
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Flutamide-induced alterations in transcriptional profiling of neonatal porcine ovaries
... Additional file 2: Heatmap illustrating the expression profile of all 280 differentially expressed genes (DEGs; P -adjusted < 0.05 and log 2 fold change ≥ 1.0) in the ovaries of porci[r] ...
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Cellular transcriptional profiling in human lung epithelial cells infected by different subtypes of influenza A viruses reveals an overall down regulation of the host p53 pathway
... p53 transcriptional activity during influ- enza virus infection by luciferase assay or the detection of phosphorylated p53 in infected cells [25,34], we observed in our experimental conditions a significant ...
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Transcriptional profiling of laser microdissected stamen abscission zones in Arabidopsis
... Laser capture microdissection and related technologies permit the harvest of individual cells and cell types. Isolation of either nucleic acids or proteins from laser-captured cells supports such downstream applications ...
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Role of WDHD1 in Human Papillomavirus-Mediated Oncogenesis Identified by Transcriptional Profiling of E7-Expressing Cells
... performed RNA sequencing (RNA-seq) to characterize the transcriptional profile of keratinocytes expressing HPV 16 (HPV-16) E7. At the transcriptome level, 236 genes were differentially expressed between E7 and ...
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Transcriptional Profiling of the Immune Response to Marburg Virus Infection
... To better understand the overall response to Marburg virus challenge, we undertook a transcriptomic analysis of immune cells circulating in the blood following aerosol exposure of rhesus[r] ...
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In vivo transcriptional profiling of Plasmodium falciparum
... To confirm the accuracy of the results from the oligonucleotide array and to confirm the in vivo overexpression of a SERA antigen PFB0355, the relative expression of five genes that had [r] ...
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Transcriptional profiling of host cell responses to encephalomyocarditis virus (EMCV)
... host transcriptional responses to various ...studied transcriptional host responses to feline immunodefi- ciency virus and discussed the similarities of that to HIV ...
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Genome-Wide Analysis of Chromosomal Features Repressing Human Immunodeficiency Virus Transcription
... We have investigated regulatory sequences in noncoding human DNA that are associated with repression of an integrated human immunodeficiency virus type 1 (HIV-1) promoter. HIV-1 integration results in the formation of ...
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Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates
... Similar transcriptional profiling in the rhesus monkey dentate gyrus across postnatal development identified a highly overlapping set of SGZ-enriched genes, which can be divided based on temporal profiles ...
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Effects of aerobic and anaerobic environments on bacterial mutation rates and mutation spectra assessed by whole genome analyses : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Genetics at Massey University, Palmerston North, New Zealand
... conditions. Transcriptional profiling, via RNAseq, of REL4536 grown under aerobic and anaerobic environments revealed that repair genes, especially those involved in the repair of GCRs, were generally ...
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Identification of molecular pathways affected by pterostilbene, a natural dimethylether analog of resveratrol
... between transcriptional profiling and deletion mutant analyses has been reported in the literature by investigators using both selected indi- vidual mutants as well as whole-genome mutant popula- tions ...
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Identification of global regulators of T-helper cell lineage specification
... lized transcriptional profiling data from three different profiling platforms to get a high-confidence list of genes involved in T-helper cell lineage ...
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The free-living flatworm Macrostomum lignano
... Macrostomum lignano is a free-living flatworm that is emerging as an attractive experimental animal for research on a broad range of biological questions. One feature setting it apart from other flatworms is the ...
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Molecular response to aromatase inhibitor treatment in primary breast cancer
... in transcriptional profiles found in some but not all tumours in this study suggest that it is pos- sible that predicting clinical response to an AI by transcriptional profiling may, as with Ki67, be ...
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