[PDF] Top 20 An evaluation of LSU rDNA D1-D2 sequences for their use in species identification
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An evaluation of LSU rDNA D1-D2 sequences for their use in species identification
... and rDNA pseudogenes can be compared to nuclear copies of mitochondrial genes ...applicability. rDNA variation and taxonomic group delimitation Any new sequence variant in rDNA has to be homoge- ... See full document
12
Candida inconspicua and Candida norvegensis: New Insights into Identification in Relation to Sexual Reproduction and Genome Organization
... DNA sequences, notably, the D1/D2 do- main of the large subunit and the ITS loci, is considered a method of choice for the identification of ascomycetous yeast species (17, ...The ... See full document
7
Phylogenetic Location of the Spirometra Sparganum Isolates from China, Based on Sequences of 28S rDNA D1.
... nuclear rDNA gene repeat unit har- bors different regions that evolve at varying rates, thus adds useful and often significant resolution to molecular systematic estimates of phylogeny at a number of different ... See full document
10
Identification of Dermatophyte Species by 28S Ribosomal DNA Sequencing with a Commercial Kit
... 28S rDNA was performed by using the primers and the PCR mixture included in the MicroSeq D2 LSU rDNA Fungal Sequencing ...the D2 expansion DNA segment region encoding the nuclear ... See full document
5
Rapid Identification of Ascomycetous Yeasts from Clinical Specimens by a Molecular Method Based on Flow Cytometry and Comparison with Identifications from Phenotypic Assays
... the species-specific primer will hybridize to the bead and be detected by the flow ...employs species-specific primers that are hybridized onto complementary sites of the selected amplicon and, during the ... See full document
5
Molecular identification of Ammonia and Elphidium species (Foraminifera, Rotaliida) from the Kiel Fjord (SW Baltic Sea) with rDNA sequences
... different species and therefore leading to the conclusion that there was only one valid species: Ammonia beccarii (Linne´, ...the species names Ammonia batava (Hofker, 1951), ...regions D1 and ... See full document
10
Molecular Identification of Veterinary Yeast Isolates by Use of Sequence Based Analysis of the D1/D2 Region of the Large Ribosomal Subunit
... includes sequences that may not be well ...new species suggested as subdivisions of traditional ...the species Candida africana may be a separate species from ...separate species, ... See full document
7
Malassezia arunalokei sp nov , a Novel Yeast Species Isolated from Seborrheic Dermatitis Patients and Healthy Individuals from India
... strains. Sequences of the D1/D2 region of 26S rDNA are reported to have less variation (⬍1%) among newly described species in Malassezia ...these species share similar phenotypic ... See full document
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<em>Trichosporon dohaense</em>, a rare pathogen of human invasive infections, and literature review
... phenotypic identification system VITEK 2 YST may misiden- tify the species as two commonly encountered Trichosporon species, ...Accurate identification of ...accurate identification of ... See full document
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Molecular Identification and Antifungal Susceptibility Pattern of Non-albicans Candida Species Isolated from Vulvovaginal Candidiasis
... Fig. 4. Molecular phylogenetic analysis using Neighbor-Joining method with sequences of D1-D2 domain. The evolutionary history was inferred using the Neighbor-Joining method. The percentage of ... See full document
9
New Yeast Species, Malassezia dermatis, Isolated from Patients with Atopic Dermatitis
... of rDNA (26S and ITS) strongly suggests that our five isolates represent a new spe- cies in the genus ...present, D1 and D2 26S rDNA sequences are used from almost all yeasts for ... See full document
5
Evaluation of amplified rDNA restriction analysis (ARDRA) for the identification of Mycoplasma species
... 16S rDNA to obtain a maximum discriminatory ...The use of mycoplasma-specific primers binding to internal regions of the 16S rRNA genes may be helpful and result in a higher specificity as was already ... See full document
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Identification of yeast species from uncultivated soils by sequence analysis of the hypervariable D1/D2 domain of LSU–rDNA gene in Kermanshah province, Iran
... yeast species in uncultivated soils collected from different areas of Kermanshah province, Iran, by analyzing hypervariable D1/D2 domain of the large subunit (LSU) rDNA gene sequence ... See full document
12
Assessment of Ribosomal Large Subunit D1 D2, Internal Transcribed Spacer 1, and Internal Transcribed Spacer 2 Regions as Targets for Molecular Identification of Medically Important Aspergillus Species
... objective identification of fungi compared to traditional phenotypic ...molecular identification of some ...the identification of 13 medically important Aspergillus species: Aspergillus ... See full document
12
Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5' end of the large subunit (26S) ribosomal DNA gene
... phylogenetic species concept through comparison of the fertility of genetic crosses among divergent heterothallic ascomycetous yeasts with the extent of nucleotide substitutions in the variable LSU ... See full document
8
Two different 16S rRNA genes in a mycobacterial strain
... 16S rDNA sequences of some well-established species ...the sequences of genes A and B were identical to X93027 and X93031 of the EMBL database, ...These sequences were described under ... See full document
6
Identification of cephalopod species from the North and Baltic Seas using morphology, COI and 18S rDNA sequences
... the identification of cephalopod species from the North and the Baltic ...Seas. Species identification based on molecular data can be very useful in cases where morphological features are hard ... See full document
13
Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi
... xylophilus sequences (nematode – BAD34543-5), B_ciner1 – GHF45 cellulase from Botrytis cinerea (fungus – CCD33730), ...acid sequences from Aphelenchoidea under WAG + I + G + F ...acid sequences from ... See full document
12
Atlantic moonfishes: independent pathways of karyotypic and morphological differentiation
... some species (Molina and Galetti ...Although species analyzed con- tained a nucleolar organizer pair as a specific marker, the genus Selene displayed several conservative traits in its ...18S rDNA ... See full document
8
Identification of Chlorophyceae based on 18S rDNA sequences from Persian Gulf.
... Phylogenetic analyses of the 18S rDNA sequences were performed. We isolated eleven chlorophycean of environmental clones. This study is the first of its type that describes Chlorophyceae from waters of the ... See full document
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