[PDF] Top 20 Event extraction for DNA methylation
Has 10000 "Event extraction for DNA methylation" found on our website. Below are the top 20 most common "Event extraction for DNA methylation".
Event extraction for DNA methylation
... of methylation sites are annotated in the ...for event arguments, where two thirds of Pub- Meth subcorpus events contain only a Theme argument identifying the GGP, while events where both Theme and Site are ... See full document
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PubMed Scale Event Extraction for Post Translational Modifications, Epigenetics and Protein Structural Relations
... automatic extraction of PTMs from text has also been considered in a number of earlier studies, these have primarily involved single PTM reactions extracted with special-purpose meth- ods (Hu et ...of DNA ... See full document
9
Mono-allelic retrotransposon insertion addresses epigenetic transcriptional repression in human genome
... less DNA methylation than the young and active Alu Y family (data not ...of DNA transposons and retrotranspo- sons. DNA methylation on retrotransposons is thought to be an intermediate ... See full document
8
Involvement of Cytosine DNA methylation in different developmental stages of Aeluropus littoralis
... DNA methylation as epigenetic mark plays a key role in normal differential and developmental processes as well as in dynamic gene regulation at the genomic ...assess DNA methylation pattern in ... See full document
12
Analysis of the transcriptional regulation of cancer-related genes by aberrant DNA methylation of the cis-regulation sites in the promoter region during hepatocyte carcinogenesis caused by arsenic
... aberrant methylation sites, we found that the DNA methylation levels in the promoter regions of 4 nucleotide excision repair pathway genes (ERCC2, POLD3, POLE2 and RPA1) were higher than in the ... See full document
14
Combining DNA methylation and RNA sequencing data of cancer for supervised knowledge extraction
... In addition, we performed the classifications with multiple rule-based models obtained by CAMUR. Therefore four different classification algorithms were applied on three data matrices (RNA sequencing, DNA ... See full document
23
Insertion of Foreign DNA into an Established Mammalian Genome Can Alter the Methylation of Cellular DNA Sequences
... l DNA- containing BHK21 clones or the T637 cell line were ...genomic DNA was alkali denatured in ...The DNA was then treated with sodium ...denatured DNA solution (110 ml) was mixed with 1 ml ... See full document
13
DNA methylation and DNA methyltransferases
... binding event interposes an acidic autoinhibitory loop between the active site and unmethylated DNA to inhibit de novo methylation ...other DNA (cytosine-5) methyltransferases (reviewed in ... See full document
10
Dynamic changes in global and gene specific DNA methylation during hibernation in adult thirteen lined ground squirrels, Ictidomys tridecemlineatus
... that DNA methylation is dynamically altered during hibernation and that there can be an organized response by DNA methylation to environmental cues in adult ...these DNA ... See full document
9
Evaluating Large scale Text Mining Applications Beyond the Traditional Numeric Performance Measures
... those event occurrences where the trigger words are found to be much more frequent for another event ...clusters: DNA methylation/Methylation, Regulation/Positive reg- ulation/Negative ... See full document
9
Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha
... differential methylation, we only used cytosines that were sequenced in at least two out of three replicates across all tissue types (1,005,661 in total, 994,696 without X and Y chromosome scaffolds, which we ... See full document
17
Liberal Event Extraction and Event Schema Induction
... the event structure ...3.5 Event Extraction for ACE/ERE Types We manually select the event triggers in the ACE and ERE evaluation sets discovered by our AMR- based approaches that are ACE/ERE ... See full document
11
Review Article Genetic and epigenetic alterations during renal carcino- genesis
... demonstrated DNA hypermethylation of the VHL gene in 19% of examined tumors ...a DNA demethylating agent, 5-aza-2'-deoxycytidine, resulted in re-expression of the VHL ...by DNA methylation. ... See full document
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Genome Wide Characterisation of DNA Methylation in an Invasive Lepidopteran Pest, the Cotton Bollworm Helicoverpa armigera
... Genome Wide Characterisation of DNA Methylation in an Invasive Lepidopteran Pest, the Cotton Bollworm Helicoverpa armigera 1 Genome wide characterisation of DNA methylation in an invasive Lepidopteran[.] ... See full document
26
Inexpensive metagenomic DNA extraction protocol with high quality from marine sediments contaminated by petroleum hydrocarbons.
... for DNA extraction from soils contaminated with polycyclic aromatic hydrocarbons (PAHs) (Mahmoudi et ...low DNA yields, compromising bacterial ...mgDNA extraction protocol from marine ... See full document
11
COPE: Interactive Exploration of Co-occurrence Patterns in Spatial Time Series.
... Selecting a target location. COPE supports three ways for selecting an initial target location. First, the analyst can directly select a spatial object in the event view. Second, the analyst can enter an object’s ... See full document
15
Genome-wide screening of DNA methylation in bovine blastocysts with different kinetics of development
... includes DNA methylation patterns, in this study we compared the global DNA methylation profile of embryos with different kinetics of development in order to identify general pathways and ... See full document
13
DNA methylation and cognitive aging
... of DNA methylation of Dnmt3a2 target ...that DNA methylation is associated with transcriptional repression (Figure 3a and ...exonic DNA methylation may serve as a transcriptional ... See full document
11
Aberrant methylation of MUC1 and MUC4 promoters are potential prognostic biomarkers for pancreatic ductal adenocarcinomas
... the methylation status of MUC1 and MUC4 promoter regions in pancreatic tissue samples from 169 patients with various pancreatic lesions by the methylation specific electrophoresis (MSE) ...several ... See full document
13
Epigenetics mechanisms and degenerative diseases
... global DNA methylation patterns studied in various ...of methylation of repetitive elements in blood of AD patients revealed LINE-1 methylation was increased in AD patients compared with ... See full document
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