[PDF] Top 20 Functional profiling of the gut microbiome in disease-associated inflammation
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Functional profiling of the gut microbiome in disease-associated inflammation
... lipid metabolism in cecal and fecal samples in mice receiving dietary treatment, whereas levels of several di- and monosaccharides (maltose, gentibiose and tagatose) were decreased. When the mice (both healthy and with ... See full document
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A metagenomic study of the gut microbiome in Behcet’s disease
... (MGSs) profiling for the BD patients MGS profiling was also performed to investigate the BD-associated microbial ...abundance profiling identified 13 ...as microbiome markers to dis- ... See full document
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Recovery of the Gut Microbiome following Fecal Microbiota Transplantation
... ABSTRACT Clostridium difficile infection is one of the most common health care-associated infections, and up to 40% of patients suffer from recurrence of disease following standard antibiotic therapy. ... See full document
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Alterations in the gut microbiome and metabolism with coronary artery disease severity
... metabolite profiling data, we found that the serum me- tabolites were significantly different between all patients with CAD and healthy ...significantly associated with the Gensini score, number of stenosed ... See full document
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β Defensins: Farming the microbiome for homeostasis and health
... the microbiome also consists of viral, fungal, archael, and protozoan communities, about which comparatively little is ...pathogen-associated inflammation and disease and maintaining ... See full document
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(Dis)Trust your gut: the gut microbiome in age-related inflammation, health, and disease
... the gut microbiota is directly related to the leaky gut ...“leaky gut” during advanced age whereby the intestinal barrier preventing harmful substances from reaching the bloodstream is perme- ... See full document
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Gut microbiome-host interactions in health and disease
... the gut microbiota for human health has led to therapeutic approaches such as bacteriotherapy [83] and bioecological control ...pre-morbid gut microbiota of the host or by prebiotics, probiotics and ... See full document
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A Metagenomic Meta-analysis Reveals Functional Signatures of Health and Disease in the Human Gut Microbiome
... indicate disease provide insight into disease etiology and advance the development of disease-specific diag- ...of microbiome-based clinical ...modules associated with methane production ... See full document
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Functional Dynamics of the Gut Microbiome in Elderly People during Probiotic Consumption
... included profiling the results to identify redun- dant reference strains for each strain X in the reference database as follows: (i) we computed how many reads aligned to X, (ii) how often X was uniquely matched ... See full document
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Disease Severity and Immune Activity Relate to Distinct Interkingdom Gut Microbiome States in Ethnically Distinct Ulcerative Colitis Patients
... lower disease se- verity, MCS1, as our in silico predictions suggested, was signifi- cantly enriched for ophthalmate (a biomarker of increased oxidative stress and depleted glutathione) (14), oxidative-stress- ... See full document
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The heart-gut axis: new target for atherosclerosis and congestive heart failure therapy
... heart disease (CHD) are leading causes of mortality in the Western world affecting about one-third of the ...the gut micro- biome in the pathogenesis of atherosclerosis, CVD and heart ...that gut ... See full document
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Biomarkers for monitoring intestinal health in poultry: present status and future perspectives
... The advent of next generation sequencing technology has allowed studying the composition of the intestinal microbial community in different animal species includ- ing poultry. The most widely used phylogenetic marker is ... See full document
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The In Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome
... abrupt microbiome perturbation eventually establishes a new stable state by 1 week after antibiotic ...the gut because of dietary perturbations to enable a causative connection between the microbiota and ... See full document
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A Molecular Level Landscape of Diet Gut Microbiome Interactions: Toward Dietary Interventions Targeting Bacterial Genes
... Subsequently, the chemical composition of these 14 foods was retrieved from the NutriChem database (see Table S1B in the sup- plemental material) and 437 unique food compounds (also called phytochemicals throughout this ... See full document
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Selecting age-related functional characteristics in the human gut microbiome
... One characteristic of TF-iDF is that it tends to pick fea- tures with less frequent occurrences. To determine if solely choosing low-occurrence features yields good clas- sification performance, Grubb's test for ... See full document
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MEGAN-LR: new algorithms allow accurate binning and easy interactive exploration of metagenomic long reads and contigs
... In addition, the size of a MAF file is often very large and subsequent sorting and parsing of alignments can be time consuming. To address these issues, we have imple- mented a new program called “MAF2DAA” that takes MAF ... See full document
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Compositional and Functional Differences in the Human Gut Microbiome Correlate with Clinical Outcome following Infection with Wild Type Salmonella enterica Serovar Typhi
... The development of a human challenge model provided us with a unique oppor- tunity to characterize the composition and function of the gut microbiota following immunization and subsequent exposure to S. Typhi and ... See full document
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Gut Microbiota Mediates the Protective Effects of Dietary Capsaicin against Chronic Low Grade Inflammation and Associated Obesity Induced by High Fat Diet
... high-throughput microbiome analyses emphasize the main effects of CAP on SCFA-producing bacteria, we quantified butyryl coenzyme A (CoA) transferase (BCoAT) genes using ...of gut microbiota in different ... See full document
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Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction
... background, gut microbiome, and environmental trig- gers, contribute to the onset of IBD symptoms (2, ...human gut microbiome is a key player in this process as a consequence of interacting ... See full document
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Dysbiosis of the Gut Microbiome is associated with Tumor Biomarkers in Lung Cancer
... dominant microbiome in NSE ...Crohn’s disease and ...special microbiome may serve as a diagnosis, prognosis, therapeutic target or fecal microbiota transplantation in lung cancer ...normal ... See full document
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