[PDF] Top 20 Structural basis of genomic RNA (gRNA) dimerization and packaging determinants of mouse mammary tumor virus (MMTV)
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Structural basis of genomic RNA (gRNA) dimerization and packaging determinants of mouse mammary tumor virus (MMTV)
... and structural analyses of MMTV pack- aging signal RNA initially revealed four pal sequences (pal I, pal II, PBS pal, and pal III, Figure ...in RNA dimerization and ...MMTV RNA dime- rization ... See full document
21
Structural Basis for RNA Binding and Homo-Oligomer Formation by Influenza B Virus Nucleoprotein
... expressing RNA polymerase subunits of influenza B/Panama/45/90 virus were described previously ...viral RNA (vRNA)-like RNA, in which the noncoding sequences of influenza B NA segment flank the ... See full document
10
The connection domain in reverse transcriptase facilitates the in vivo annealing of tRNALys3 to HIV 1 genomic RNA
... region of GagPol. ∆# designates the number of amino acid residues deleted from the C terminus of GagPol, and solid black lines represent the sequences not deleted. The RT sequence is divided into its known ... See full document
7
Structural Characteristics and Nucleotide Sequence Analysis of Genomic RNA from RD-114 Virus and Feline RNA Tumor Viruses
... The genetic relatedness of RD-114 and Crandell virus can be interpreted in at least two ways: i these two viruses could represent two different strains of endogenous feline RNA tumor vir[r] ... See full document
7
Structural organization of poliovirus RNA replication is mediated by viral proteins of the P2 genomic region.
... To test the association of P2 proteins with viral RNA under guanidine, 2 mM guanidine hydrochloride was added to the infected cultures at 3 h p.i.; after UV cross-linking at 3.75 h, the [r] ... See full document
8
The P gene product of hepatitis B virus is required as a structural component for genomic RNA encapsidation.
... The results obtained with point mutations, deletions, and insertions scattered throughout the P gene clearly demonstrate that i a P gene product containing all functional domains is requ[r] ... See full document
9
Structural Basis for Linezolid Binding Site Rearrangement in the Staphylococcus aureus Ribosome
... the RNA threading protocol in the Rosetta software package (20) for generating the rRNA and the Sculptor (22) application in the PHENIX software package combined with loop modeling as implemented in coot ... See full document
7
Secondary Structural Elements within the 3′ Untranslated Region of Mouse Hepatitis Virus Strain JHM Genomic RNA
... Conserved structural elements within the 3⬘ UTR of MHV and BCoV genomic RNA participate in DI RNA ...DI RNA replication assays demon- strated that this 7-bp structure was required for ... See full document
9
Norovirus Genome Circularization and Efficient Replication Are Facilitated by Binding of PCBP2 and hnRNP A1
... require RNA-RNA contacts in the CS but the participation of cellular proteins is required to stabilize these ...5=-3= RNA- RNA interactions, we selected proteins for further study on the ... See full document
17
Structural basis of nucleic acid binding by Nicotiana tabacum glycine-rich RNA-binding protein: implications for its RNA chaperone function
... We have shown that NtRRM domain is a canonical RRM domain that binds a CTG/CUG containing nucleic acid with low micromolar affinity and short complex lifetime. Our NMR data allow the guanosine to be unambiguously ... See full document
14
The genomic basis of parasitism in the Strongyloides clade of nematodes
... Cultivated and collected parasite material: V.L.H., D.R.D., W.G., J.B.L., E.N., H.M., A.S., A.K., J.D.S., D.H., T.K. and M.V. Prepared DNA, RNA and protein: V.L.H., N.R., H.M.B. and T.K. Prepared libraries: ... See full document
11
Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1
... The structural mechanism underlying H-NS-mediated trap- ping of RNA polymerase in the open initiation complex (33) was investigated by simultaneous addition of H-NS and heparin to preformed RNAP 䡠 DNA ... See full document
6
Network analysis of the genomic basis of the placebo effect
... or RNA virus infec- tions, are not clinically known to have objective placebo responses that change pathophysiology (20); the proximity of these diseases suggests that there may be a subset of diseases in which ... See full document
16
Structural characterization of virion proteins and genomic RNA of human parainfluenza virus 3.
... The M protein of HPIV3 has a molecular weight of 35 x 1 is associated with the envelope of the virion, and aggregates under low-salt conditions, and intrachain disulfide bonds affect its[r] ... See full document
6
Sequence and Structural Elements at the 3′ Terminus of Bovine Viral Diarrhea Virus Genomic RNA: Functional Role during RNA Replication
... positive-stranded RNA genome consisting of a single open reading frame and untranslated regions (UTRs) at the 5 * and 3 * ...viral RNA replication pathway. Employing a subgenomic BVDV RNA (DI9c) that ... See full document
13
Structural and Functional Characterization of an Influenza Virus RNA Polymerase-Genomic RNA Complex
... cellular RNA polymerase II (Pol II) transcripts in a template-dependent manner (6, 31) and gen- erates capped oligonucleotides that serve as primers to copy the RNP template (52, ...the genomic RNA ... See full document
11
Structural basis of RNA polymerase III transcription initiation.
... transcription initiation factor TFIIIB participates in two steps of promoter opening... Near-atomic 321.[r] ... See full document
35
Structural and functional basis for RNA cleavage by Ire1
... Both structural (Figure 1d) and functional data with Ire1KR32(R1039A) therefore show that the HLE plays an important role in recognition of RNA ...an RNA stem-loop into Ire1 RNase (below) suggests ... See full document
15
A Novel Self-Replicating Chimeric Lentivirus-Like Particle
... the RNA genome from the alphavirus Venezuelan equine encephalitis virus (VEE) encoding a subset of lentivirus gene products sufficient for self-assembly of lentivirus-like parti- cles that present Gag and Env in ... See full document
16
Characterization of defective RNAs derived from RNA 3 of the Fny strain of cucumber mosaic cucumovirus.
... the genomic RNAs, since the amount of D RNA remains either much less than or approximately equal to that of the genomic ...from RNA 3 of the Fny strain, and their formation appears to be ... See full document
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