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MetaCHIP: community-level horizontal gene transfer identification through the combination of best-match and phylogenetic approaches

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Academic year: 2020

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Figure

Fig. 1 Workflow of MetaCHIP
Fig. 2 Example output for the flanking regions of an identified HGTs. Genes encoded on the forward strand are displayed in light blue, andgenes coded on the reverse strand are displayed in light green
Fig. 3 The similarity between the tree based on 16S rRNA gene sequences and the SCG protein trees with different level of genomecompleteness
Fig. 5 The effect of sequencing depth on the recovery of introduced gene transfers with different assemblers and different levels of genetic divergence
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