5' end
The bovine leukemia virus encapsidation signal is discontinuous and extends into the 5' end of the gag gene.
... the 5 * end of the gag ...the 5 * untranslated leader ...* end of the gag gene, the pol gene, and the env ...the 5 * end of the gag ...
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Poliovirus Requires a Precise 5′ End for Efficient Positive-Strand RNA Synthesis
... nonauthentic 5⬘ ends are repaired during poliovirus replication (17, 36), and several possible re- pair mechanisms could be envisioned: (i) the 5⬘ end of the input RNA has to be trimmed by a ...
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Interaction of Cellular Proteins with the 5′ End of Norwalk Virus Genomic RNA
... the 5⬘ end of the NV genome contains elements that bind specifically to different cellular proteins, some of which include HeLa proteins, such as La, hnRNPL, PTB, and PCBP-2, that are known to be involved ...
5
Epigenetic Control of Chromosome Breakage at the 5′ End of Paramecium tetraurelia Gene A
... deletion (5). One report tentatively identified a few copies of gene A in the d12 macronuclear genome and characterized a variant in which Mac ends formed at the 5⬘ end of gene A (22). Hybridization ...
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RNase H Cleavage of the 5′ End of the Human Immunodeficiency Virus Type 1 Genome
... the 5 ⬘ end of the RNA template exactly matches the 5 ⬘ end of the HIV-1 genome, the double-stranded region must be 12 bases long (or longer) in order to see even minimal cleavage; a 10-base ...
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Phylogeny of γ proteobacteria inferred from comparisons of 3’ end 16S rRNA gene and 5’ end 16S 23S ITS nucleotide sequences
... 3’ end of the 16S rRNA gene and a 70 bp sequence at the 5’ end of the 16S-23S ITS se- ...the 5’ end of the 16S-23S ITS sequence added a greater discriminatory power among closely ...
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Polymorphisms at the 5' end of the apolipoprotein AI gene and severity of coronary artery disease
... Elevated HDL-cholesterol (C) and apo AI are associated with decreased coronary artery disease (CAD) risk. We de- termined distributions of two MspI polymorphisms of the apo AI gene, associated in other studies with ...
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Analysis of Mice Lacking DNaseI Hypersensitive Sites at the 5′ End of the IgH Locus
... age, likely due to a lack of food intake. These mice exhibit an abnormal limp grasping phenotype, i.e. mice clasp their front and hind feet almost immediately upon being lifted by their tail (Fig. 6A, B). Furthermore ...
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Children with 5′-end NF1 gene mutations are more likely to have glioma
... (n 5 310), children with glioma were found to be more likely to harbor 59-end gene mutations (OR 5 2; p 5 ...(OR 5 2.32; p 5 0.005) or 59-end nonsense (OR 5 ...
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Three different cellular proteins bind to complementary sites on the 5'-end-positive and 3'-end-negative strands of mouse hepatitis virus RNA.
... To detect the possible cellular proteins involved in the replication of mouse hepatitis virus RNA, we performed RNA-protein binding studies with RNAs representing both the 5' and 3' ends[r] ...
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Activation of 2′ 5′ oligoadenylate synthetase by stem loops at the 5′ end of the West Nile virus genome
... gene 5 (MDA-5), double stranded RNA-activated protein kinase (PKR), 29 59 -oligoadeny- late synthetases (OAS) and adenosine deaminase acting on RNAs (ADARs) ...
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3'-end processing and kinetics of 5'-end joining during retroviral integration in vivo.
... of 5 9 -end joining is not known for any trans- posable ...mediate 5 9 -end ...the 5 9 ends of the Tn7 DNA were joined to the target DNA (3), but no attempts to identify what components ...
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The SHAPE of tRNA folding and of the 5'-end of the HIV-1 genome
... exactly at the AUG start codon (gray bar, Figure 5.3) Second, in our secondary structure model (Figure 5.2), nucleotides in the 5' regulatory domain are 1.7 times more likely to be paired than those in the 3' ...
127
Adenovirus DNA replication in vitro: a protein linked to the 5' end of nascent DNA strands.
... In addition to conserved sequences at the origin of DNA replication, a protein has been found covalently attached to the 5' termini of adenovirus DNA and has a molecular weight of 139 Do[r] ...
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The 5' end of the equine arteritis virus replicase gene encodes a papainlike cysteine protease.
... To prove that the EAV PCP domain was responsible for the observed proteolytic processing of the ORFla protein and to identify possible active site residues, single amino acid substitutio[r] ...
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Further characterization of mRNA's of mouse hepatitis virus: presence of common 5'-end nucleotides.
... To ascertain whether these oligonucleotides were the cap-containing oligonucleotides, the oligonucleotides identical to oligonucleotide 82 in these mRNA's were isolated from the gels, di[r] ...
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AdapterRemoval: easy cleaning of next generation sequencing reads
... 3’ end of the read and possibly also the 5’ ...the end of the ...the 5’ end due to adapter contamination has an even higher probability of wrong- fully discarding a genuine match since ...
7
Genome organization of RNA tumor viruses II. Physical maps of in vitro-synthesized Moloney murine leukemia virus double-stranded DNA by restriction endonucleases.
... The order of the fragments in relation to the 5' end and 3' end of the genome was determined either by using fractional-length M-MLV double-stranded DNA for digestion by restriction endo[r] ...
16
A genome-linked copy of the NS-1 polypeptide is located on the outside of infectious parvovirus particles.
... This suggests that most of the virus released from infected cells into the culture medium has the same 5' end as RF DNA but that approximately 24 nucleotides at the 5' end are accessible[r] ...
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Flexibly Structured Model for Task Oriented Dialogues
... Our work is related to end-to-end task-oriented di- alogue systems in general (Liu and Lane, 2018; Williams et al., 2017; Lowe et al., 2017; Li et al., 2018; Liu et al., 2018; Budzianowski et al., 2018; ...
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