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automated pipeline

An automated pipeline for analyzing medication event reports in clinical settings

An automated pipeline for analyzing medication event reports in clinical settings

... analyzing medication event reports in clinical settings. The event reports are manually reviewed in a case by case manner at regular time intervals, which are ineffi- cient and labor intensive. In addition, the collected ...

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Automated pipeline for anatomical phenotyping of mouse embryos using micro CT

Automated pipeline for anatomical phenotyping of mouse embryos using micro CT

... computer-automated pipeline that is able to identify abnormal mutant phenotypes in embryonic and perinatal lethal ...The pipeline consists of three image analyses: intensity, deformation and atlas ...

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An automated pipeline for bouton, spine, and synapse detection of in vivo two-photon images

An automated pipeline for bouton, spine, and synapse detection of in vivo two-photon images

... In addition to examining boutons and spines separately by two-photon microscopy, it is also possible to visualize synaptic connections with identified boutons and spines that are in close proximity. Although the ...

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Computational based automated pipeline corrosion data assessment

Computational based automated pipeline corrosion data assessment

... offshore pipeline may cause some difficulties (Lechhi, 2011; ...important pipeline parameter based on in-line inspection data within a computational reliability assessment model for probability o f failure ...

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MetaLab: an automated pipeline for metaproteomic data analysis

MetaLab: an automated pipeline for metaproteomic data analysis

... By contrast, both qualitative and quantitative information were integrated in the MetaLab pipeline, which allows the peptide XIC intensity infor- mation from different samples to be used[r] ...

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phylotaR: An automated pipeline for retrieving orthologous DNA sequences from GenBank in R

phylotaR: An automated pipeline for retrieving orthologous DNA sequences from GenBank in R

... taxa and uses a subsequent cluster 2 to identify shared clusters across large taxonomic groups. The[r] ...

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Corpus based discovery of semantic intensity scales

Corpus based discovery of semantic intensity scales

... fully automated pipeline to extract gradable terms from a corpus, group them into clusters reflecting the same scale and estab- lish an ordering among ...

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IsoPlotter(+): A Tool for Studying the Compositional Architecture of Genomes.

IsoPlotter(+): A Tool for Studying the Compositional Architecture of Genomes.

... completely automated pipeline, called IsoPlotter + to carry out all segmentation analyses, including graphical display, and built a repository for compositional domain maps of all fully sequenced vertebrate ...

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Informed baseline subtraction of proteomic mass spectrometry data aided by a novel sliding window algorithm

Informed baseline subtraction of proteomic mass spectrometry data aided by a novel sliding window algorithm

... The automated baseline subtraction method was deployed on six publicly available proteomic MS datasets using six different m/z-axis ...the automated baseline subtraction pipeline was assessed ...

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CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characterization of fungal microbiota

CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characterization of fungal microbiota

... an automated pipeline for comparative analysis of internal transcribed spacer (ITS) pyrosequences amplified from metagenomic DNA isolates and representing fungal ...This pipeline performs a variety ...

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A pipeline to extract drug-adverse event pairs from multiple data sources

A pipeline to extract drug-adverse event pairs from multiple data sources

... semi-automated pipeline to extract the AE pairs from adverse event databases, enhanced by potential drug-adverse event pairs mined from non-traditional sources such as text from MEDLINE abstracts and user- ...

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Toward incremental dialogue act segmentation in fast paced interactive dialogue systems

Toward incremental dialogue act segmentation in fast paced interactive dialogue systems

... our automated RDG-Image agent (Paet- zel et ...an automated agent to incrementally recognize the various DAs, such as yes-no ques- tions (Q-YN), target descriptions (D-T), and yes answers (A-Y) in real-time ...

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Atypical Inputs in Educational Applications

Atypical Inputs in Educational Applications

... an automated scoring system with atypical ...an automated scoring system that is ill-prepared to handle ...the automated processing pipeline also needs to be able to handle this correctly and ...

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Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project

Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project

... Because of its high SNR and contrast between white and cortical grey matter, the average attenuation profile of the b ¼ 1000 s/mm 2 shell is used for registration of diffusion data to the high-resolution T2-weighted ...

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Development of Methodology for Main Pipelines Linear Section Stress-Strain State Сhanges Assessment

Development of Methodology for Main Pipelines Linear Section Stress-Strain State Сhanges Assessment

... on-surface pipeline part, is ...of pipeline axis is determined, including the specific accuracy at the control moment of ...the pipeline axis is known (for example, according to the design ...

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Agile Software Architecture (2014) pdf

Agile Software Architecture (2014) pdf

... See Architecture trade-off analysis method ATAM Automated deployment pipeline automation level, 312–313 collaborative application life cycle management tools, 312 development scripts, 31[r] ...

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An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals

An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals

... DoE based on orthogonal arrays combined with a Latin square for positional arrangement of the genes was applied to reduce the 2592 combinations down to 16 representative constructs, achieving a compression ratio of ...

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Integrating Multiple NLP Technologies into an Open source Platform for Multilingual Media Monitoring

Integrating Multiple NLP Technologies into an Open source Platform for Multilingual Media Monitoring

... fully automated media ingestion pipeline that can record live broadcasts, detect and transcribe spo- ken content, translate from several lan- guages (original text or transcribed speech) into English, 1 ...

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Biomechanical Profiling of Caenorhabditis elegans Motility

Biomechanical Profiling of Caenorhabditis elegans Motility

... To make our integrated platform accessible to all users regardless of computational background, we derived a simple graphical user interface for automated analysis of swimming movies. After defining the location of ...

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Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos

Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos

... However, automated methods for the sensitive detection and quantification of RNAs at cellular resolution in embryos are ...analysis pipeline for automated transcript detection and cell ...analysis ...

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