Bacterial community composition
Investigation of bacterial community composition and abundance in a lowland arable catchment
... Hence, the samples from the River Wensum are less diverse than shallow water sediments (Zhu et al. 2013) , but show similar diversity to deep sea sediments (Zhu et al. 2013) and also seawater samples (Chow et al. 2013). ...
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Atmospheric deposition impact on bacterial community composition in the NW Mediterranean
... and bacterial community composition in the NW Mediterranean Sea by means of 16S rDNA ...certain bacterial groups over others depending on the initial conditions, as the inorganic nutrients and ...
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ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition.
... for bacterial community ...resulting community composi- tion estimates can be substantially improved by aggregating the reads from a sample with an unsupervised machine learning approach prior to the ...
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The Impact of Land Use on Bacterial Community Composition and Physicochemical Properties of Soil
... on bacterial community composition and some physicochemical properties of soil, a study was carried out in three different land uses (orchard, farm and shrub) in arid-region soils located in ...
10
Enhanced bacterial decomposition with increasing addition of autochthonous to allochthonous carbon without any effect on bacterial community composition
... in bacterial activity, the question re- mains whether this is accompanied by a change in bacterial community composition ...consumption, bacterial biomass and an efficient usage of the ...
11
SEK: sparsity exploiting k-mer-based estimation of bacterial community composition.
... The currently available version of the Matlab-based COMPASS software does not allow for training with custom databases, so a direct comparison to SEK is not yet possible. To enable fast estimation, we adopt an approach ...
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Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes
... freshwater bacterial community composition and dynamics are not yet well ...freshwater bacterial community and observe annual and seasonal trends in ...distinct bacterial ...
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Temperature-driven shifts in the epibiotic bacterial community composition of the brown macroalgaFucus vesiculosus
... the community structure of epibacteria on the macroalga ...epibacterial community apart from temperature (such as salinity and irradiance) will be addressed in a subsequent ...the bacterial ...
12
Investigating the effect of phytoplankton on bacterial community composition across different environmental contexts
... Emily Kara and Georgia Wolfe. Thanks to Nick Youngblut for helping me with various software programs and providing me with constructive feedback on manuscripts in progress. I thank Jim Graham for providing me with algal ...
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Roles of bacterial community composition in biofilms as a mediator for larval settlement of three marine invertebrates
... the bacterial density of the biofilms, but did coincide with the marked differences in bacterial community composition between the biofilms developed at different ...with bacterial ...
11
Effect of long-term mineral fertilizer application on soil enzyme activities and bacterial community composition
... soil bacterial community from a long-term fertilizer experiment (37 years) were analysed to elaborate the effects of long-term mineral fertilizer application on soil enzyme activities and bacterial ...
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Complexity, Temporal Stability, and Clinical Correlates of Airway Bacterial Community Composition in Primary Ciliary Dyskinesia
... Bacterial Community Composition in Primary Ciliary Dyskinesia Geraint B. Rogers, a,b Mary P. Carroll, c,d Nur Masirah M. Zain, e Kenneth D. Bruce, e Karen Lock, d Woolf Walker, d,f Graeme Jones, g ...
7
Factors affecting the bacterial community composition and heterotrophic production of Columbia River estuarine turbidity maxima
... ETM bacterial communities differed even though the samples had comparable salinities, while the community composition was similar for those of July 2008 despite a ~9 PSU dif- ference in salinity ...
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Comparative Analysis of Bacterial Community Composition and Structure in Clinically Symptomatic and Asymptomatic Central Venous Catheters
... in bacterial colonization of TIVAPs obtained from two French ...the bacterial community parameters between TIVAPs suspected (symptomatic) or not (asymptomatic) of ...or community marker to ...
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Spatial variation of bacterial community composition at the expiry of spring phytoplankton bloom in Sendai Bay, Japan
... of bacterial community composition have been well studied in relation to a phytoplankton ...The community composition and dominant species changed accompany with the bloom development ...
8
Filtration artefacts in bacterial community composition can affect the outcome of dissolved organic matter biolability assays
... between bacterial community composition and DOM dynamics, the high repro- ducibility of both measurements across the technical repli- cates suggests that this system could be a potentially useful ...
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Bacterial Community Composition Associated with Pyrogenic Organic Matter (Biochar) Varies with Pyrolysis Temperature and Colonization Environment
... microbial community composition associated with PyOM particles is poorly ...type. Bacterial communities associated with PyOM particles from high-C soils were similar to those in non-PyOM-amended ...
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Research Article The Bacterial Community Composition of the Bovine Rumen Detected Using Pyrosequencing of 16S rrna Genes
... microbial composition in the rumen of dairy cows has been extensively surveyed using next-generation sequencing technologies [ 19 , 24 ...rumen bacterial community composition between dairy ...
11
Effect of long-term fertilization strategies on bacterial community composition in a 35-year field experiment of Chinese Mollisols
... on bacterial community composition in a 35-year field experiment of Chinese ...the community composition at each taxonomic level varied considerably among the fertilization ...
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Bacterial community composition and extracellular enzymatic function in marine waters
... Overall, community diversity may play a role in some of these comparisons, but not a systematic ...active community followed exactly the opposite pattern because of the great decrease in diversity ...
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