Basic Local Alignment Search Tool
Euphorbia tirucalli modulates gene expression in larynx squamous cell carcinoma
... XLS 74 kb Abbreviations ACTB: beta-actin; AKt: protein kinase; ANXA1: annexin A1; APC: adenomatous polyposis coli; BLAST: basic local alignment search tool; C3: C3 convertase enzyme; C5:[r] ...
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Age and fecal microbial strain specific differences in patients with spondyloarthritis
... bioinformatics tool in combination with the Basic Local Alignment Search Tool (BLAST) that permitted assessment of species and even strain-level identification of certain ...
10
A novel real time PCR assay for specific detection of Brucella melitensis
... BLAST: Basic local alignment search tool; BSL: Biosafety level; CCUG: Culture Collection University of Göteborg; Cq: Quantification cycle; DNA: Deoxyribonucleic acid; EMERGE: Efficient ...
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Purification and Biochemical Characterization of a Protease Inhibitor II Family from Jalapeño Pepper (Capsicum annuum L )
... BAEE: N-α-benzoyl-L-arginine ethyl ester BCA: Bicinconinic acid to determinated protein BLAST: Basic local alignment search tool algorithm CD: Circular dichroism CID-MS: Collision-induce[r] ...
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STINGRAY: system for integrated genomic resources and analysis
... BLAST: Basic local alignment search tool; CDS: Coding sequences; CGI: Common gateway interface; DBMS: Database management system; DDBJ: DNA Data Bank of Japan; EMBOSS: The European ...
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Proteomic analysis of purified protein derivative of Mycobacterium tuberculosis
... BLAST: Basic Local Alignment Search Tool; CFP10: Culture filtrate antigen EsxB; EF-Tu: Elongation factor 2; EsxJ: ESAT-6 like protein EsxJ; EsxO: ESAT-6 like protein EsxO; ESAT-6: Early ...
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Bovine leukemia virus discovered in human blood
... (Basic Local Alignment Search Tool) site was to compare primer specificity for only two spe- cies: bovine leukemia virus and Homo sapiens, and to insure that the primers we used were ...
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Pulmonary arterial response to Angiostrongylus vasorum in naturally infected dogs: echocardiographic findings in two cases
... Abbreviations 2D: two-dimensional echocardiography; Ao: aorta; AT: acceleration time; BLAST: Basic Local Alignment Search Tool; ECG: electrocardiogram; ET: ejection time; IFAT: immunoflu[r] ...
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Molecular surveillance of respiratory viruses with bioaerosol sampling in an airport
... (BLAST): Basic Local Alignment Search Tool; (cDNA): complementary deoxyribonucleic acid; (DNA): deoxyribonucleic acid; (MERS-CoV): middle east respiratory syndrome coronavirus; (NCBI): ...
5
Identification of Bacteria from Soil of Cameron Highlands
... Bacteria are a large group of unicellular microorganisms. Bacteria are ubiquitous in every habitat on Earth for example in soils, radioactive waste, water and as well as in organic matter and the live bodies of plants ...
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Ca2+ regulatory proteins in cardiomyocytes from the right ventricle in children with congenital heart disease
... Abbreviations ANOVA: one-way analysis of variance; BLAST: Basic Local Alignment Search Tool; CaMKII: Ca2+/calmodulin-dependent protein kinase II; CASQ: Calsequestrin; CHD: Congenital Hea[r] ...
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Molecular signature of selective microRNAs in Cyprinus carpio (Linnaeus 1758):a computational approach
... BLAST: Basic local alignment search tool; ccr: Cyprinus carpio ; CD11b: Cluster of differentiation molecule 11B; DGCR8: Digeorge syndrome chromosomal [OR CRITICAL] region 8; Erk-1/ 2: ...
8
CABRA: Cluster and Annotate Blast Results Algorithm
... The most extended way to functionally annotate a sequence is using basic local alignment search tool (BLAST) searches [1] and the orthology information drawn from them. These are ...
6
Robust Real Time Stereoscopic Alignment
... automatic alignment of cameras that utilises stereoscopic imagery separated at varying distances just below that of the intraocular ...stereoscopic alignment in real-time is a non-trivial process that ...
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Computational Molecular Coevolution
... sequence alignment quality and coevolutionary-inference methods revealed that such methods are very sensitive to the system- atic misalignments discovered in public ...sequence alignment databases. ...
200
Structural investigation of the Arabidopsis thaliana circadian clock
... Ampicilin Arabidopsis Response Receiver Basic Local Alignment Sequence Tool protein CHLOROPHYLL NB BINDING PROTEIN CCA 1 binding site CIRCADIAN CLOCK ASSOCIATED 1 COLD AND CIRCADIAN REGU[r] ...
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Academic medical centers as innovation ecosystems to address population –omics challenges in precision medicine
... and alignment of companion diagnostic development with clinical drug development, in essence a provision of guidance for obtaining a CE-mark on a diagnostic assay that is a companion diagnostic ...
12
Investigating the bacteriocin library Lactobacillus plantarum A 1 : presented in partial fulfilment of the requirements for the degree of Master of Science in Microbiology at Massey University, Manuwatū Campus, Palmerston North, New Zealand
... Figure 4.2.9 Segments of agar plates treated with supernatant from either A-1 or N1 87 Figure 4.2.10 Agar plates showing inhibition caused by ASM1 and PlnEF ................... 88 Figure 4.2.11 Agar plates showing ...
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The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis
... with 5 and 18 clusters at the nested first and second levels of hierarchy, respectively. All clusters in the two estimates were significantly supported when compared against alternative partitions (posterior probability ...
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Synthesis and Enzymatic Studies of Selenium Derivatized Nucleosides, Nucleotides and Nucleic Acids
... We further extend our approach to cyclic patterns. First considering that every connected subgraph has a spanning tree, an intuitive idea is to enumerate all possible subgraph which covers all vertices, to run our ...
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