Comparative gene expression analysis
Comparative gene expression analysis in stems of Dolichos purpureus and Arabidopsis thaliana
... Homeobox gene (GR463505, At4g32880), which are both transcription factors function in transcription ...a gene essencial for maintenance of meristem structural organization, which is inside of the ...
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COMPARATIVE ANALYSIS OF GENE EXPRESSION PROFILES AMONG CONTRASTING MULBERRY VARIETIES UNDER COLD STRESS CONDITION
... tolerant gene sequences of WRKY46, Spermidine synthase, early response to dehydration10 (ERD10), TIFY10, Cysteine proteinase Inhibitor (CPI), Cold regulated 413 plasma membrane protein 2 (COR413) were retrieved ...
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A Comparative Analysis of Gene-Expression Data of Multiple Cancer Types
... B. Pathway enrichment analysis of differentially expressed genes. We have carried out a pathway enrichment analysis on genes that are differentially expressed in any of the seven cancer types. Overall, a ...
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Gene co-expression network analysis in Rhodobacter capsulatus and application to comparative expression analysis of Rhodobacter sphaeroides
... Weighted gene co-expression network analysis (WGCNA) has been widely used to analyze transcriptional profiles since its introduction in 2005 [14,15], and has proved to be a useful approach for the ...
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A comparative gene expression database for invertebrates
... and expression domains Comparing developmental stages within a single spe- cies does not represent major difficulties and depends on the fine scale precision of the gene expression annotation ...
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Comparative Analysis of Data Mining Algorithms for Cancer Gene Expression Data
... This work is carried to provide a brief outline of the state of art techniques SVM, ANN, Logistic Regression, Decision Tree and Random Forest applied on datasets for classification. These are applied on two most common ...
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A Comparative Analysis of Classification of Micro Array Gene Expression Data Using PCA
... the analysis of microarray data, because the high dimensionality of gene expression microarray data set hurts generalization performance of ...Classification analysis of microarray gene ...
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Comparative analysis of gene expression in normal and cancer human prostate cell lines
... Relative gene expression of 65 can- cer-related genes was determined by the quantita- tive polymerase chain reaction ...(Q-PCR). Expression of 29 genes was changed in LNCaP cells, 20 genes in DU145 ...
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Comparative gene expression profiling analysis of urothelial carcinoma of the renal pelvis and bladder
... the gene expres- sion profiles of these tumors with those of 14 normal kidney and 14 urothelial carcinoma from renal pelvis, most of them (n = 13) were used in our previous publi- cation [6] (with one new addition ...
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STATISTICS AND GENE EXPRESSION ANALYSIS
... common gene expression experiment is the comparative ...two expression levels for each of the genes spotted onto the ...of gene expression ...
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Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite
... microarray analysis and qRT-PCR ...avoid gene duplicates, we merged probes with same gene ID which automatically shrinks the matrix so that all rows of probes from the same gene are merged ...
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Comparative Analysis of Xenorhabdus koppenhoeferi Gene Expression during Symbiotic Persistence in the Host Nematode
... rRNA gene in the in vivo cDNA population before but not after normalization suggested that bacterial cDNAs were successfully purified from the nematode ...gyrA gene in all other cDNA populations except the ...
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Assessment and Reimbursement of Gene Expression Tests in Breast Cancer in Europe: A Comparative Policy Analysis
... • Patients with early breast cancer do not benefit equally from chemotherapy and its use is associated with the risk of short- and long-term adverse events. • Gene expression tests provide prognostic value ...
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Comparative Analysis of Traditional and Modified DECODE Method in Small Sample Gene Expression Experiments
... analyzing gene expression data- differential expression analysis and differential co-expression ...each gene is classified as high or low differentially expressed and high or low ...
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Comparative gene expression between two yeast species
... these expression datasets more carefully, we developed a statistical metric, Local Network Simila- rity (LNS), to assess correlation patterns of ...for analysis of individual matched datasets without the ...
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Comparative evaluation of microarray-based gene expression databases
... common analysis method for expression ...i.e. gene or samples, with similar ...similar expression patterns may constitute some new, previously undefined subgroups, ...Component Analysis ...
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Comparative Analysis of Gene Expression in Virulent and Attenuated Strains of Infectious Bronchitis Virus at Subcodon Resolution
... gammacoronaviral gene expression. We demonstrate that gene ex- pression shows considerable intraspecies variation, with single nucleotide polymor- phisms being associated with altered production of ...
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A Comparative Analysis of Gene Expression Profile in Liver and Esophageal Cancer using Expressed Sequence Tags
... regarding gene mapping and gene ...for gene expression regulation and directly affects the gene transcription ...STR analysis of the core promoter region of these ...
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BμG@Sbase--a microbial gene expression and comparative genomic database.
... Research in bacteria has fundamentally changed in the last few years from a piecemeal approach of characterizing individual determinants to a global analysis of host– pathogen interactions. This status has been ...
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Comparative analyses of Defense gene expression in Norway spruce sapwood
... observed expression pattern, showing down- regulation of PaDAHP1 and 3 and up regulation PaDAHP2 a possible carbon shift towards secondary metabolite ...(qPCR) analysis of ...
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