comparative genome
Comparative Genome Analysis of Three Eukaryotic Parasites with Differing Abilities To Transform Leukocytes Reveals Key Mediators of Theileria Induced Leukocyte Transformation
... the genome of Theileria orientalis, a tick-borne apicomplexan protozoan parasite of ...a comparative genome analysis of ...the genome sequences of Theileria species with different abilities to ...
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Pan Genome and Comparative Genome Analyses of Propionibacterium acnes Reveal Its Genomic Diversity in the Healthy and Diseased Human Skin Microbiome
... a comparative genome analysis of 82 ...average genome. Comparative genome analysis showed that within each lineage, the strains isolated from the same individuals were more closely ...
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Genetic Linkage Map and Comparative Genome Analysis for the Atlantic Killifish (Fundulus heteroclitus)
... annotated genome assembly is available: medaka (Oryzias latipes) [17] and zebrafish (Danio rerio) ...tilapia genome is less well defined precluding the ...killifish genome returned the original ...
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Comparative Genome Mapping in Brassica
... Comparative analysis of the Brassica A, B and C genomes also revealed a striking conserva- tion of genome content, suggesting that all three Bras- sica genomes have inherited [r] ...
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Comparative genome mapping of Sorghum and maize.
... T h e fact that most sorghum linkage groups are composed of RFLP loci predominately from two maize chromosomes may reflect either the putative polyploid ancestry [r] ...
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Fisher: a program for the detection of H/ACA snoRNAs using MFE secondary structure prediction and comparative genomics – assessment and update
... cerevisiae genome reported in Schattner et al. [3] was complemented with comparative genome analysis and free-energy calcula- tions, to further reduce the number of false ...The comparative ...
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Tracing Nonlegume Orthologs of Legume Genes Required for Nodulation and Arbuscular Mycorrhizal Symbioses
... pathway. Comparative genome analyses reported in this article indicate that the putative orthologs of several genes known to be required for legume nodu- lation are present in nonlegumes, strongly arguing ...
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Vol 68, No 2 (2016)
... for comparative genome mapping and evolutionary studies in conifer species in the future because of the greater transferability of gene-based SSRs compared with anonymous SSRs in related ...
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Original Article Unclassified renal cell carcinoma: a clinicopathological, comparative genomic hybridization, and whole-genome exon sequencing study
... Abstract: Unclassified renal cell carcinoma (URCC) is a rare variant of RCC, accounting for only 3-5% of all cases. Studies on the molecular genetics of URCC are limited, and hence, we report on 2 cases of URCC analyzed ...
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Group 3 Chromosome Bin Maps of Wheat and Their Relationship to Rice Chromosome 1
... and comparative genome relationships of 996 chromosome bin-mapped expressed sequence tags (ESTs) accounting for 2266 restriction fragments (loci) on the homoeologous group 3 chromosomes of hexaploid wheat ...
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ACTINOMYCETES ISOLATED FROM WETLAND AND HILL PADDY DURING THE WARM AND COOL SEASONS IN SARAWAK, EAST MALAYSIA
... The results of this project demonstrate the potential of Sarawak for the discovery of novel actinobacteria species. The strategy followed in this study allowed the isolation and selection strains belonging to 24 genera ...
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Transcriptome analysis of Plasmodium berghei during exo erythrocytic development
... gap, genome wide RNA‑seq analyses of various exo‑erythrocytic stages of Plasmo- dium berghei including sporozoites, samples from a time‑course of liver stage development and detached cells were ...
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Genomic comparative analysis and gene function prediction in infectious diseases: application to the investigation of a meningitis outbreak
... whole genome se- quencing by NGS technology, comparative genomics, and gene function prediction was set up and applied to investi- gate ...Whole genome sequencing demonstrated gen- etic changes ...
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Porphyromonas gingivalis Strain Diversity
... Microarray design. Whole-genome microarrays provided by the Pathogen Functional Genomics Resource Center (The Institute for Genomic Research [TIGR], Rockville, MD) were used in this study. The microarrays were ...
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New techniques to detect genomic variation
... The large scale sequencing of thousands of exomes and genomes from disease cohorts using next generation sequencing (NGS) is expected to uncover causal gene variants in many thus far unresolved cases. Currently, ...
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Medical informatics
... name). Comparative genomics can be used to identify evolutionary ...a genome database, DNA must first be extracted from ...using comparative genomics, scientists have discovered many of the genes ...
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Whole genome sequencing uncovers a novel IND-16 metallo-β-lactamase from an extensively drug-resistant Chryseobacterium indologenes strain J31
... Results: 16s rRNA sequencing indicated the isolate belongs to C. indologenes. We assembled a total of 1095M bp clean-filtered reads into 171 contigs by de novo assembly. The draft genome of C. indologenes J31 ...
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Complete genome sequence of Clostridium perfringens CBA7123 isolated from a faecal sample from Korea
... The genome contained tetracycline-resistance genes: two tetA(P) genes, one each in the chromosome and plas- mid; and one tetB(P) gene in the ...003 genome also contained the same tetracycline-resist- ance ...
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Whole Genome Sequence and Comparative Genomics Analysis of Multi drug Resistant Environmental Staphylococcus epidermidis ST59
... S. epidermidis G6_2, revealed 9 antibiotic resistance determinates across the chromosome and plasmids (Table 2). This included aminoglycoside resis- tance gene aac(6’) – aph(2”), beta-lactam resistance genes mecA and ...
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Diagnostic utility of novel combined arrays for genome-wide simultaneous detection of aneuploidy and uniparental isodisomy in losses of pregnancy
... routines decades ago. Since then, clinical geneticists have been facing two major diagnostic concerns: First of all, mosaic constellations in embryo or placenta remain a profound analytical problem related to POC ...
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