Cycle Phase Specific Differentially Regulated Genes:
Statistical modelling of transcript profiles of differentially regulated genes
... increasing phase followed by a decline or plateau, and after assess- ment of how well it fitted the observed data compared with both the simpler exponential model and the more complex double exponential ...between ...
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TRIM5α and TRIM22 Are Differentially Regulated According to HIV-1 Infection Phase and Compartment
... stimulation in some cases. However, even under these circum- stances, it was clear that the knockdown of either factor limited VSV-G-pseudotyped HIV infection of target cells. In conclusion, in this study, we have ...
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Synergy among Differentially Regulated Repressors of the Ribonucleotide Diphosphate Reductase Genes of Saccharomyces cerevisiae
... repressed genes with well-characterized regulon-specific DNA binding sites, searching for Mot3 sites close to those ...-4 genes encoding two of the proteins of ribonucle- otide diphosphate reductase ...
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Autophagic flux is highly active in early mitosis and differentially regulated throughout the cell cycle
... cell cycle, early mitosis and S phase have relatively higher autophagic flux than G1 and late G2 phases, which might be helpful to degrade the damaged organelles and provide energy during S phase and ...
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Identification of Yeast Cell Cycle Regulated Genes Based on Genomic Features
... cell cycle gene of G2/M ...predicted genes were not identified as such by the meta-analysis in ...cell cycle induction. For example, we predicted Cdc8 as a G1-specific gene with a probability ...
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Ubiquitin specific proteases are differentially expressed throughout the Schistosoma mansoni life cycle
... Conclusions In conclusion, we describe the USP enzyme repertoire in S. mansoni and their regulated expression in the parasite life cycle. This differential profile of transcripts can re- flect the ...
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UNCLES: Method for the identification of genes differentially consistently co-expressed in a specific subset of datasets
... the genes that are consistently co-expressed in some given datasets or distinctly in a pre-specified subset of them, while bicluster- ing methods aim at identifying the genes that are co- expressed in a ...
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Transcription of Genes in the Biosynthetic Pathway for Fumonisin Mycotoxins Is Epigenetically and Differentially Regulated in the Fungal Maize Pathogen Fusarium verticillioides
... biosynthetic genes TRI4 and TRI5 was still detectable ...to specific sites in the genome by sequence-specific transcription factors (15, ...FUM genes are less respon- sive to chromatin ...
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Microarray profiling of progesterone-regulated endometrial genes during the rhesus monkey secretory phase
... of genes that appear to be differentially expressed, this "function by association" approach has potential caveats in the view of some investigators ...Some genes known to be involved in a particular ...
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Identification of Specific Cellular Genes Up-Regulated Late in Adenovirus Type 12 Infection
... cellular genes with significantly altered transcription in HeLa cells at 12, 24, 32, or 48 h after infection with Ad12 in comparison to mock-infected HeLa ...late phase of infection was clearly estab- ...
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A Cell Cycle-Regulated Toxoplasma Deubiquitinase, TgOTUD3A, Targets Polyubiquitins with Specific Lysine Linkages
... two genes (TGGT1_271070 and TGGT1_266500) annotated as hypothetical proteins and one (TGGT1_260510) annotated as a ubiquitin thioes- ...Three genes (TGGT1_410520, TGGT1_362240, and TGGT1_356210) were ...
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DNA microarray profiling of genes differentially regulated by the histone deacetylase inhibitors vorinostat and LBH589 in colon cancer cell lines
... in vitro observations to clinical settings. Pharmacokinetic data from clinical trials following a twice-daily dose of vorinostat determined that the half-life was in the range of 1 - 3.5 h and maximal serum ...
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Hypertonicity-affected genes are differentially expressed in clear cell renal cell carcinoma and correlate with cancer-specific survival
... 223 genes, which were identified in the present study by RNA-Seq to be differentially expressed by hypertonicity, for the prediction of cancer-specific survival ...these genes showed ...
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Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes
... POU4F2 has been shown to be essential for the develop- ment of retinal ganglion cells (RGC) [37] and has also been suggested to play an important role for a number of processes including proliferation and invasiveness ...
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Enhanced Expression of Cell Cycle Regulatory Genes in Virus-Specific Memory CD8+ T Cells
... might differentially regulate the expression of genes that control the cell cycle to facilitate homeostatic ...cell cycle regulatory genes were compared between transgenic naive and ...
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FAT 10, a gene up-regulated in various cancers, is cell-cycle regulated
... G2/M phase of cell-cycle is ...G2/M phase of the ...more specific repression is observed at the G2/M phase of the cell-cycle where FAT10 was shown to interact with mitotic ...
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Decoding c-Myc networks of cell cycle and apoptosis regulated genes in a transgenic mouse model of papillary lung adenocarcinomas
... Specifically, the histopathology of transgenic lung parenchyma evidenced hyper-chromatic precancerous monolayers of atypical bronchiolar alveolar cells. This condition is typical for non-mucinous AHH, and was previously ...
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PHASE-SPECIFIC GENES FOR MACROCONIDIATION IN NEUROSPORA CRASSA
... Preliminary characterization and genetics of conidial separation defective strains: When strains UCLA 37, UCLA 101, FS 590 and FS 591 were grown as slant cultures ea[r] ...
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Tissue specific expression and regulation of the Mitogen Regulated Protein genes
... regulated in vivo, mrp3 promoter/lacZ constructs were analyzed in cell culture.. and in transgenic mice. of 3' sequences were sufficient to express detectable levels of p-galactosidase[r] ...
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Pomelo II: Finding differentially expressed genes
... down regulated genes in each two- class comparison and their intersection ...of genes that are up regulated in both the contrast between classes 0 and 1 and the contrast between ...
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