differential allelic expression
Variants in the 3'UTR of the ovine Acetyl-Coenzyme A Acyltransferase 2 gene are associated with dairy traits and exhibit differential allelic expression
... the expression of the ACAA2 gene could be attributed to AEI, an AEI assay using TaqMan probes was ...of differential expression of the 2 alleles of the ACAA2 gene due to a cis-acting mecha- ...nism. ...
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Association of breast cancer risk with genetic variants showing differential allelic expression: Identification of a novel breast cancer susceptibility locus at 4q21.
... rs11099601 lies on 4q21 in a region containing numerous genes including FAM175A (ABRAXAS), HELQ and MRPS18C. It was selected on the basis of its association with differential allelic expression in ...
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Extent of differential allelic expression of candidate breast cancer genes is similar in blood and breast
... their expression profile [32-34]. As most previous studies of differential allelic expression have been performed on lym- phoblastoid cell lines (LCL) and future case-control studies using DAE ...
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Dyslexia risk variant rs600753 is linked with dyslexia specific differential allelic expression of DYX1C1
... a differential allelic expression of a binding site of a such factor, the effect of the SNP can be ...gene expression levels in a dyslexia-specific ...specific expression of a SNP in ...
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Association of Breast Cancer Risk with Genetic Variants Showing Differential Allelic Expression: Identification of a Novel Breast Cancer Susceptibility Locus at 4q21
... rs11099601 lies on 4q21 in a region containing numerous genes including FAM175A (ABRAXAS), HELQ and MRPS18C. It was selected on the basis of its association with differential allelic expression in ...
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ALPHA-AMYLASE OF MAIZE: DIFFERENTIAL ALLELIC EXPRESSION AT THE AMY-1 GENE LOCUS, AND SOME PHYSICOCHEMICAL PROPERTIES OF THE ISOZYMES
... Using endosperm and leaf tissue olf germinating seedlings, we have shown that the maize alpha-amylase Amy-1 is controlled by a pair of codominant alleles, similar to the [r] ...
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Detecting differential allelic expression using high-resolution melting curve analysis: application to the breast cancer susceptibility gene CHEK2
... since SNP identification by screening regulatory regions does not consistently allow prediction of the effect of observed SNPs on gene expression. Thus, knowledge of the effect of genetic variants affecting mRNA ...
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DIFFERENTIAL ALLELIC EXPRESSION AT A LOCUS ENCODING AN ENDOSPERM PROTEIN IN TETRAPLOID WHEAT (TRITICUM TURGIDUM)
... the amino acid composition and the molecular weight determined by SDS electro- phoresis, as well as the fact that each of these proteins give only one band by SDS electropho[r] ...
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Stress by Heat Shock Induces Massive Down Regulation of Genes and Allows Differential Allelic Expression of the Gal/GalNAc Lectin in Entamoeba histolytica
... Overview of gene expression modulated by heat shock in Entamoeba histolytica. To obtain an overview of our microarray results, we classified genes according to their genomic annota- tions and then tabulated the ...
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Association of breast cancer risk with genetic variants showing differential allelic expression: Identification of a novel breast cancer susceptibility locus at 4q21
... each allelic expression trait was carried out by first normalizing allelic expression ratios at each SNP using a polynomial method [72] and then calculating averaged phased allelic ...
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Parent-of-Origin Effects on mRNA Expression in Drosophila melanogaster Not Caused by Genomic Imprinting
... same allelic expression in reciprocal crosses was observed not only for all imprinting candidate genes but also for all 15 control genes examined (Figure ...for allelic expression dif- ...
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Bench to bedside review: Association of genetic variation with sepsis
... in expression were attributed to pheno- mena such as genomic imprinting (methylation causing inactivation of one parental haplotype) [95] and X-chromo- some inactivation ...allele-specific expression is ...
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A High-Resolution Melting Approach for Analyzing Allelic Expression Dynamics
... course expression, the transcripts of tubers during cold storage using the AGPase gene locus (primer CC1533A) were ...The expression activity shifted from a higher melting curve (day 0 and day 2 of storage) ...
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Metatranscriptomic analysis of lignocellulolytic microbial communities involved in high-solids decomposition of rice straw
... values, expression of decon- structive glycoside hydrolases was estimated to constitute ...gene expression in both the mesophilic and thermophilic ...
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An intronic PICALM polymorphism, rs588076, is associated with allelic expression of a PICALMisoform
... The biological significance of the rs588076 association with D18-19 PICALM is complex. D18-19 PICALM tran- scripts account for 1-2% of total PICALM expression [2]. Thus rs588076 is significantly associated with ...
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Growing oocyte-specific transcription-dependent de novo DNA methylation at the imprinted Zrsr1 -DMR
... The mouse embryo undergoes genome-wide de novo DNA methylation during the post-implantation period, at a level comparable to the growing oocyte [19, 25, 26]. In fact, the early embryo expresses factors essential for de ...
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Cardiac alpha myosin heavy chains differ in their induction of myocarditis Identification of pathogenic epitopes
... In order to study whether the allelic differences between BALB/c and C57B/6 myosin contribute to the differential susceptibility to myosininduced myocarditis seen in these two strains, m[r] ...
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Differential Expression and Roles of Staphylococcus aureus Virulence Determinants during Colonization and Disease
... factor expression by a bac- terium during commensal and pathogenic ...comparing expression patterns between colonization and disease states, laying the groundwork for large-scale microarray studies for a ...
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H558R, a common SCN5A polymorphism, modifies the clinical phenotype of Brugada syndrome by modulating DNA methylation of SCN5A promoters
... Peripheral blood was obtained from all the subjects. Genomic DNA was extracted from leukocytes using a QIAamp DNA Blood Mini Kit (QIAGEN, Hilden, Germany) following the normal protocol. We genotyped rs1805124 in all 100 ...
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Identification and differential expression analysis of MicroRNAs encoded by Tiger Frog Virus in cross species infection in vitro
... Iridoviruses are icosahedral cytoplasmic viruses that have double-stranded DNA genomes with terminal re- dundancy and circular permutation [19]. According to the Ninth Report of the International Committee on Taxonomy of ...
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