DNA-Binding with One Finger (Dof)
PCR amplification and bioinformatics assessment of promoters of PBF-DOF (DNA binding with one finger) genes of finger millet
... (DNA binding with one finger) family is a plant specific transcription factor known to be involved with regulating diverse functions in plants and have been extensively studied in many ...
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The Putative Zinc Finger of the Human Cytomegalovirus IE2 86-Kilodalton Protein Is Dispensable for DNA Binding and Autorepression, Thereby Demarcating a Concise Core Domain in the C Terminus of the Protein
... to DNA, and with one exception this is what we found ...of binding to the CRS (lane 7), again indicating that this mutant still resides within the highly sensitive C-terminal ...zinc finger of ...
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Contribution of the Zinc Finger to Zinc and DNA Binding by a Suppressor of Posttranscriptional Gene Silencing
... binds DNA in a sequence- nonspecific manner with a preference for dsDNA, in contrast to other TrAPs that bound ssDNA with higher efficiency (16, 27), and that the cysteine-rich motif participates in this ...
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The finger domain of simian virus 40 large T antigen controls DNA-binding specificity.
... Mutations in the phosphorylation sites of simian virus 40 SV40 T antigen alter its origin DNA-binding specificity for sites I and II and affect SV40 DNA replication activity.. Initiation[r] ...
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An affinity-based scoring scheme for predicting DNA-binding activities of modularly assembled zinc-finger proteins
... that one single ZFD module will not always be optimal or adequate for recognition of its cognate 3-bp subsite in different multi-finger ZFP ...to binding to related but off-target sequences with sufficient ...
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Nuclear receptors from the ctenophore Mnemiopsis leidyi lack a zinc-finger DNA-binding domain: lineage-specific loss or ancestral condition in the emergence of the nuclear receptor superfamily?
... LBD but lack a conserved zinc-finger DBD, a domain that is conserved across all reported NRs in animals (with the exception of two genes unique to vertebrates). By applying a phylogenomic approach using NR ...
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Non base contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding
... of DNA contacting and non- contacting residues, we examined in silico mutations in which we exchanged the DNA contacting and non- contacting residues among randomly selected C2H2-ZFs that have ...
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Allosteric Inhibition of Zinc Finger Proteins by DNA Binding Polyamides
... isotherms represent binding at the match target site in the minor groove, which has the sequence shown in the lower right panel of the figure, and which overlaps [r] ...
153
Transactivation, Dimerization, and DNA-Binding Activity of White Spot Syndrome Virus Immediate-Early Protein IE1
... zinc finger in a tran- scription factor (for example, human cytomegalovirus imme- diate-early protein IE2 [1]), it is not always used to bind ...bind DNA, there are usually several (often three or more) ...
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BmBlimp-1 gene encoding a C2H2 zinc finger protein is required for wing development in the silkworm Bombyx mori
... zinc finger (C2H2-ZF) proteins represent the most common class of transcription ...cloned one C2H2-ZF protein gene of Bombyx mori, BGIBMGA000319, that is orthologous to B-lymphocyte-induced maturation ...
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S-nitrosation on zinc finger motif of PARP-1 as a mechanism of DNA repair inhibition by arsenite
... zinc finger domains associate with zinc ions in order to maintain protein conformation, and function as a critical structure for DNA recognition and ...binding. Binding of each zinc ion ...
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The DNA Binding Domain of a Papillomavirus E2 Protein Programs a Chimeric Nuclease To Cleave Integrated Human Papillomavirus DNA in HeLa Cervical Carcinoma Cells
... zinc finger nucleases which require extensive engineering and/or selection to achieve their requisite specificity, this chimeric nuclease did not require any modification of the viral DNA binding ...
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Koreski_unc_0153D_18349.pdf
... Figure 2.4. The GA repeats in the H3–H4p are required for HLB formation, and retargeted CLAMP recruits HLB factors. We integrated transgenes carrying 12 tandem arrays of the wild-type histone gene cluster (A) or a ...
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Zinc Finger Transcription Factors as Molecular Targets for Nitric Oxide-mediated Immunosuppression: Inhibition of IL-2 Gene Expression in Murine Lymphocytes
... In conclusion, inhibition of the DNA binding activities of transcription factors such as the zinc finger proteins Spl and EGR-1 appears to be a molecular mechanism for the inhibition of [r] ...
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Cellular Zinc Finger Protein 622 Hinders Human Adenovirus Lytic Growth and Limits Binding of the Viral pVII Protein to Virus DNA
... multifunctional DNA-binding pro- tein pVII, which is involved in virus DNA packaging and extracellular immune signal- ing ...pVII binding to viral DNA in the infected cells and elevated ...
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Functional and Genetic Characterization of the Oligomerization and DNA Binding Properties of the Drosophila Doublesex Proteins
... Ph.D. Dissertation, University of California, Davis. BURTIS, 1993 The Drosophila doublesex proteins share a novel zinc finger related DNA binding domain. GOLEMIS, 1995 Correla[r] ...
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DNA Binding Studies of Ternary Copper (II) Complexes of Doxycycline with Polypridyl Ligands
... of binding of small molecules to DNA ...with DNA, kinking/ bending of the DNA helix toward the minor or major groove leads to a decrease in the viscosity of DNA solution as a result of ...
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The role of ligand in oestrogen receptor dimerisation and DNA binding
... the binding of another transcription factor (HNF 5) without yielding detectable binding of the glucocorticoid receptor (Grange et al ...the binding of transcription factor NF-1 to a more distal ...
232
Ludwigsen, Johanna (2017): ATP-dependent nucleosome remodeling by ISWI: insights into mechanism and regulation. Dissertation, LMU München: Fakultät für Biologie
... peptide binding site nor of the bound peptide con- formation and is therefore suitable for predicting complexes between proteins and motifs from intrinsically unstructured ...
198
The effects of copy cover compare on handwriting skills for a second grade student with severe behavioral issues
... The study took place in a large urban elementary school in the Pacific Northwest. Students were enrolled in this classroom for all academic time other than electives such as PE and Music. The study took place on ...
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