Gene-specific marker development and association analysis
Assembly of 500,000 inter specific catfish expressed sequence tags and large scale gene associated marker development for whole genome association studies
... This project was supported by the Community Sequencing Program of the Joint Genome Institute of the Department of Energy, and partially by grants from USDA NRI Animal Genome Basic Genome Reagents and Tools Program ...
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Development of a D genome specific marker resource for diploid and hexaploid wheat
... Hence, development of a high-throughput mapping technology that combine both gene-based and repeat junction-based markers is needed to generate maps that have better coverage of the entire ...genome ...
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Development of an isolate-specific marker for tracking Phaeomoniella chlamydospora infection in grapevines
... molecular marker in New Zealand isolate A21. Characterization of the 1010 bp marker band showed that it had 50% identity to moxY, a gene involved in the aflatoxin biosynthetic pathway of Aspergillus ...
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Virulence Gene and Pandemic Group Specific Marker Profiling of Clinical Vibrio parahaemolyticus Isolates
... sodium dodecyl sulfate) were denatured for 5 min at 95°C, applied to the microarray, and allowed to incubate for 2 h at 63°C with a MAUI hybridization system (BioMicro Systems). After hybridization, the slides were ...
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The association of Val109Asp polymorphic marker of intelectin 1 gene with abdominal obesity in Kyrgyz population
... such association in Kyrgyz population, the limitations of this analysis should also be ...phenotypic analysis of our ...a specific clinical ...
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Molecular Marker Mapping of Leaf Rust Resistance Gene Lr46 and Its Association with Stripe Rust Resistance Gene Yr29 in Wheat
... segregant analysis (BSA), which involves pooling of entries at the two extremes for a segregating trait (26), has been effectively used for identifying molecular markers associated with disease resistance genes in ...
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An IS711 Element Downstream of thebp26 Gene Is a Specific Marker of Brucella spp. Isolated from Marine Mammals
... bp26 gene, coding for a diagnostic protein antigen for brucellosis, was assessed by PCR and restriction fragment length polymorphism analysis using primers to amplify the bp26 gene with its flanking ...
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Systematic meta-analyses of gene-specific genetic association studies in prostate cancer
... case-control association studies on the risk of prostate cancer have been published worldwide, but their results were largely ...for gene-specific SNVs from at least three independent ...
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Rule based classifier for the analysis of gene-gene and gene-environment interactions in genetic association studies
... each marker was counted for each dataset and ...frequent marker was ranked as 1 st , the second most frequent marker was ranked as 2 nd , and so ...
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Marker-trait association analysis for agronomic and compositional traits in sainfoin (Onobrychis viciifolia).
... our marker systems to several, larger sainfoin populations with different genetic ...the development of experimental F 2 mapping populations or recombinant inbred ...
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Evaluation of nanopore-based sequencing technology for gene marker based analysis of complex microbial communities. Method development for accurate 16S rRNA gene amplicon sequencing
... Rapid analysis of tens or hundreds of independent specimens from medical patients or environmental samples will require a large number of technicians to collect, prepare, and analyse these ...for analysis ...
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Gene-specific methylation analysis in thymomas of patients with myasthenia gravis
... during development and cell division, whereas DNMT3A and DNMT3B are the de novo methyltransferases that establish DNA methylation patterns during early development [ 14 ...
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Gene Expression During the Development of Bacteriophage φ29 III. Analysis of Viral-Specific Protein Synthesis with Suppressible Mutants
... Mutants in cistron I were unable to attach viral chromosomes to the host cell membrane, and the protein responsible for this function has been identified.. The other viral protein playin[r] ...
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A tissue-specific gene expression template portrays heart development and pathology
... temporal development of the right ven- tricle using fetal tissue (approximately 90 days of gestation), normally developing infant right ventricular tissue, and adult right ventricular ...in gene expression, ...
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Development of a SCAR marker and a strain-specific genomic marker for the detection of the biocontrol agent strain CPA-8 Bacillus amyloliquefaciens (formerly B. subtilis)
... bp specific product to the strain CPA-8 that was sequenced and used to design SCAR (sequence-characterised amplified regions) primer ...SCAR-4 marker amplified a semi-specific fragment of 665 bp not ...
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Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla: Isolation, RFLP marker development, and physical mapping
... scale analysis of NBS-LRR RGAs in this cultivar, using a degenerate primer design strategy devised for targeted RGA amplification across monocotyledon ...via marker assisted selection ...
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A prospective study evaluating the association of specific risk factors with the development of preeclampsia
... In 2004, Conde-Agudelo et al. 55 conducted a large systematic review of predictive tests on behalf of the WHO. They identified over 50 screening tests in the published literature, of which many could be discounted ...
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Impact of marker density on the accuracy of association mapping
... Heather J Cordell, Mariza de Andrade, Marie-Claude Babron, ...
Genetic Analysis Workshop 15: Gene Expression Analysis and Approaches to Detecting Multiple Functional Loci
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Gene based bin analysis of genome wide association studies
... genetic association of a given SNP is a statisti- cal feature and does not explain by itself a ...associated marker, its haplotype block should first be ...the association can be refined by ...
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PERSPECTIVE The Future of Association Studies: Gene-Based Analysis and Replication
... Historically, association tests were limited to single variants, so that the allele was considered the basic unit for association ...As marker density increases and indirect approaches are used to ...
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