Identification of putative regulatory elements
Genome wide identification of regulatory elements in Sertoli cells
... the regulatory mechanisms that control gene expression in Sertoli ...identify putative regulatory sites in Sertoli cells, we performed DNaseI-seq on purified Sertoli cells from fetal testes just ...
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Identification of regulatory elements in the Isl1 gene locus
... separate elements that regulate transcription of Isl1 in different pancreatic cell ...conserved putative transcription factor binding sites for Areb6, Foxj2, Gata, Lef1b, Mef2, ...shared putative ...
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Putative cis regulatory elements in genes highly expressed in rice sperm cells
... the identification of cis-regulatory elements (CREs), which are conserved in sperm-expressed genes and are putatively associated with the control of cell-specific ...
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Identification and functional characterization of microRNA regulatory elements in Brassicaceae
... as in Arabidopsis [94], indicating that maize and Arabidopsis possibly share a common regulatory pathway in SAM. A microarray study on soybean found 31 miRNAs and 6 putative legume novel miRNAs expressed in ...
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Identification of Long-Range Regulatory Elements in the Human Genome
... our putative enhancer elements are highly correlated with known p300 binding sites, and their target gene promoters are enriched in RNA Polymerase II (Pol II) ...enhancer elements are conserved in ...
141
Identification of Eukaryotic Promoter Regulatory Elements Using Nonhomologous Random Recombination
... are abundant in the genome but that only serve regulatory roles in a small subset of these occurrences (1). The most common method researchers have used to identify new UASs in yeast places the promoter of ...
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Identification and functional characterization of cis regulatory elements in the apicomplexan parasite Toxoplasma gondii
... Background: Toxoplasma gondii is a member of the phylum Apicomplexa, which consists entirely of parasitic organisms that cause several diseases of veterinary and human importance. Fundamental mechanisms of gene ...
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Identification and characterization of regulatory elements in the promoter of ACVR1, the gene mutated in Fibrodysplasia Ossificans Progressiva
... observations, putative alternative 5'UTR sequences are combined to common protein-coding sequences that initi- ate in the third exon and extend over nine ...
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Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters
... cis-regulatory elements requires ex- perimental support, which demands cloning and analysis of putative promoter ...response elements within distal promoter ...
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In-silico identification of cis- acting regulatory elements in 5’ regulatory region of Betaine aldehyde dehydrogenase isoenzymes of selected monocot and dicot
... cis-acting regulatory elements (CARE) located within the regulatory region which include abiotic stress responses, hormone responses and developmental ...the identification of CARE and their ...
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Identification of high confidence RNA regulatory elements by combinatorial classification of RNA–protein binding sites
... Finally, we identified a correlation between RNA se- quences associated to our clustered RBP groups and their biological properties and/or their putative bio- logical targets. These considerations suggest that our ...
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Identification of gene co-regulatory modules and associated cis-elements involved in degenerative heart disease
... identify putative cis-regulatory motifs which may bind transcription factors that contribute to the observed pathological expression ...17 putative cis-regulatory motifs, including ELK-1, a ...
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Identification and expression analysis of genes with pathogen-inducible cis-regulatory elements in the promoter regions in Oryza sativa
... 882 putative transcripts under the control of pathogen-in- ducible promoters with these four ...for identification of rice genes involved in response to pathogen ...
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Functional Identification and Characterization of cis-Regulatory Elements
... has used sequence features, such as matches to TF binding motifs (Stormo and Fields 1998), to predict expression. Simple linear models using sequence motifs in the promoters of yeast genes can be effective in predicting ...
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Identification of regulatory elements in the CD8 gene locus.
... trophoretic mobility shift assays. Two subfragments isolated from the region encompassing this DNasel-HSS were found to form sequence specific DNA- protein complexes w ith extracts obtained from CD8'*'CD4''‘ and ...
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Identification and characterisation of MS1 putative interacting proteins and regulatory targets in Arabidopsis
... MS1 putative interacting proteins were fused with a C-terminal RFP tag, and then transformed into the tobacco leaf epidermal cells, together with the MS1 fused with a GFP tag at the C ...
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Systems-wide Identification of cis-Regulatory Elements in Proteins
... the identification of SLiMs alone would be sufficient to distinguish proteins that are regulated via interac- tions in cis from those that are not, we searched for SLiMs in our test datasets with the predictor ...
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Identification of conserved regulatory elements by comparative genome analysis
... In this report, we focus on human-rodent comparisons, as several studies have suggested that only a small portion (17- 20%) of non-coding regions are conserved (on average) at this evolutionary distance [10,17]. ...
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Polymorphic, putative regulatory elements at the MYF5/MYF6 loci and expression analysis in neonatal piglets
... several putative regulatory elements for the MYF5 and MYF6 loci covering 140 kb upstream of the MYF5 transcription initiation site in several vertebrate species (mouse, pig, human, cow, dog, chicken ...
Identification of transcriptional regulatory elements for Ntng1 and Ntng2 genes in mice
... cis-regulatory elements determine the differential gene expression patterns of these genes and that major cis-regulatory elements are located in the 85 – 45 kb upstream region of Ntng2 and in ...
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