Long terminal repeat retrotransposon
Creation of a novel telomere-cutting endonuclease based on the EN domain of telomere-specific non-long terminal repeat retrotransposon, TRAS1
... Results: Here, we created novel chimeric endonucleases to cut telomeres by fusing the endonuclease domain (TRAS1EN) of the silkworm's telomere specific non-long terminal repeat retrotransposon ...
16
A Non-Long Terminal Repeat Retrotransposon Family Is Restricted to the Germ Line Micronucleus of the Ciliated Protozoan Tetrahymena thermophila
... by long terminal repeats (LTRs) and transpose through a double-stranded DNA inter- mediate synthesized from the RNA template and then inte- grate with a mechanism similar to that used by DNA trans- posons ...
13
Boudicca, a Retrovirus-Like Long Terminal Repeat Retrotransposon from the Genome of the Human Blood Fluke Schistosoma mansoni
... rotransposons with degraded sequences may also be capable of functioning to a limited extent, since one copy can be tran- scribed and reinserted with functional proteins produced by another copy by a process of ...
14
Diversity of Long Terminal Repeat Retrotransposon Genome Distribution in Natural Populations of the Wild Diploid Wheat Aegilops speltoides
... Statistically, a more accurate study by QDA (Figure 4) iden- tifies differences in LTR retrotransposon-specific approxi- mate IRAP distances between populations (namely, the structure of population clustering). The ...
16
A long terminal repeat retrotransposon of Schizosaccharomyces japonicus integrates upstream of RNA pol III transcribed genes
... The identification of an intact LTR-retrotransposon from S. japonicus that is capable of inserting its sequence into chromosomal sites of the related fission yeast, S. pombe, of- fered the first opportunity to ...
7
A Long Terminal Repeat Retrotransposon of Fission Yeast Has Strong Preferences for Specific Sites of Insertion
... Long terminal repeat (LTR) retrotransposons are retrovi- rus-like elements that encode Gag, protease (PR), reverse transcriptase (RT), and integrase (IN) ...
12
Assessing the Extent of Substitution Rate Variation of Retrotransposon Long Terminal Repeat Sequences in Oryza sativa and Oryza glaberrima
... the short arms of chromosome 3 of both Oryza sativa and Oryza glaberrima, species that diverged ∼0.64 Ma. Since these orthologous sequences were present in a common ancestor prior to species divergence, nucleotide ...
9
Isolation and characterization of putative functional long terminal repeat retrotransposons in the Pyrus genome
... a retrotransposon inserted into a myb-related gene was associated with pigmentation loss in grape ...different retrotransposon families in plants [2, 5]. An autonomous retrotransposon is com- posed ...
10
Positive and negative regulatory elements control expression of the yeast retrotransposon Ty3.
... Dissection of the long terminal repeat regulatory region by Northern blot analysis of deletion mutants and reporter gene analysis showed that the upstream junction of [r] ...
16
A Long Terminal Repeat-Containing Retrotransposon of Schizosaccharomyces pombe Expresses a Gag-Like Protein That Assembles into Virus-Like Particles Which Mediate Reverse Transcription
... The mutation in Tf1-⌬D caused a defect in reverse tran- scription and in the packaging of RNA. This indicates that Gag plays an important role in reverse transcription by packaging the Tf1 RNA into the particles. The ...
13
A subtelomeric non-LTR retrotransposon Hebe in the bdelloid rotifer Adineta vaga is subject to inactivation by deletions but not 5' truncations
... non-long terminal repeat (LTR) retrotransposon residing primarily in subtelomeric regions of the genome in the bdelloid rotifer Adineta ...non-LTR retrotransposon Hebe from the bdelloid ...
10
Ginger DNA transposons in eukaryotes and their evolutionary relationships with long terminal repeat retrotransposons
... Of the various Gypsy lineages shown in Figure 2, no lineage clusters with Ginger1 groups with significant bootstrap support. This does not preclude the possibility that Ginger1 groups arose from particular Gypsy ...
10
The Long Terminal Repeat-Containing Retrotransposon Tf1 Possesses Amino Acids in Gag That Regulate Nuclear Localization and Particle Formation
... The binding of the N-terminal half of Nup124 to GST-Gags was performed in a binding buffer that contained 20 mM HEPES (pH 6.8), 150 mM potassium acetate, 2 mM magnesium acetate, 2 mM dithiothreitol, 0.1 mM Tween ...
16
Glucocorticoid receptor-binding site in the human immunodeficiency virus long terminal repeat.
... Chicken ovalbumin upstream region promoter transcription factor binds to a negative regulatory region in the human immunodeficiency virus type I long terminal repeat.. Regulation of HIV-[r] ...
5
Identification of a hypervariable region in the long terminal repeat of equine infectious anemia virus.
... Differences in cytopathogenicity and host cell range among infectious molecular clones of human immunodeficiency virus type 1 Downloaded from http://jvi.asm.org/ on November 10, 2019 by [r] ...
6
DNA-binding proteins that interact with the long terminal repeat of radiation leukemia virus.
... 1566-1572 0022-538X/90/041566-07$02.00/0 Copyright C 1990, American Society for Microbiology DNA-Binding Proteins That Interact with the Long Terminal Repeat of Radiation Leukemia Virus [r] ...
7
Characterization of enhancer elements in the long terminal repeat of Moloney murine sarcoma virus.
... A The promoter distal permuted A repeat pSrM13 and pSrM14, the promoter proximal B repeat pSrM15, and both 73/72-bp tandem repeats pSrM11 and pSrM12 were placed 5' to the SV40 early prom[r] ...
7
Spontaneous variation and synthesis in the U3 region of the long terminal repeat of an avian retrovirus.
... By molecular cloning of circular SNV proviral DNA from SNV-infected chicken cells, we isolated an infectious SNV clone in which the fragment containing this viral sequence had a slightly[r] ...
9
Activation of caprine arthritis-encephalitis virus long terminal repeat by gamma interferon.
... Caprine arthritis-encephalitis virus (CAEV) is a lentivirus that causes a symmetric, peripheral arthritis in adult goats that have been infected since birth (4, 14). Members of the lenti- virus family include human ...
5
The Rous Sarcoma Virus Long Terminal Repeat Promoter Is Regulated by TFII-I
... and terminal deoxynucleotidyl- transferase (TdT) gene promoters ...acids long, a hydrophobic zipper region that is not flanked by a basic region, three clusters of acidic amino acids, and six domains ...
9