Microbial community functional genes
A culture independent approach to unravel uncultured bacteria and functional genes in a complex microbial community
... whose functional gene expression has no distinguishable activity or ...inserted genes encoding designated functions, is able to screen for functionality of unknown genes from uncultured ...novel ...
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A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community
... whose functional gene expression has no distinguishable activity or ...inserted genes encoding designated functions, is able to screen for functionality of unknown genes from uncultured ...novel ...
11
A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community
... whose functional gene expression has no distinguishable activity or ...inserted genes encoding designated functions, is able to screen for functionality of unknown genes from uncultured ...novel ...
12
New Dimensions in Microbial Ecology—Functional Genes in Studies to Unravel the Biodiversity and Role of Functional Microbial Groups in the Environment
... of Functional Diversity Studies in the Habitat In view of the tremendous advances in molecular microbial ecology which was established only two decades ago, there is much enthusiasm in this research ...
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Diagnosing bioremediation of crude oil-contaminated soil and related geochemical processes at the field scale through microbial community and functional genes
... A five-point sampling, coning, and quartering method was used to collect samples; thus, a mixed sample was collected in each block at each time. About 50 g soil for each sample was collected from 15 cm below the surface ...
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Functional implications of the microbial community structure of undefined mesophilic starter cultures
... complex community of other starter culture ...the genes that were shown to be induced during cheese manufac- turing were enriched for genes involved in amino acid metabolism (cysD, argG, aspC, dapD, ...
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Community structure and distribution of functional microbial groups within two complex environments
... Here, phylogenetic analyses based on the 16S rRNA and ammonia monooxygenase subunit A amoA genes revealed the presence of putative ammonia-oxidizing archaea AOA in a diverse range of spo[r] ...
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Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation
... c genes (Larimer et ...spp. genes detected could be due to the presence of other carbon sources such as aromatic, chlorinated compounds, which were detected in the groundwater before biostimulation (Wu et ...
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Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long read assembly and proximity ligation
... the long-read sequencing platform used in this study, as size selection is often required to improve subread N50 lengths. We identified many biological features in our sample that would be missed if only a single ...
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Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies
... the community, based on sequenced bacterial and eukaryotic ribosomal genes, showed a gradual decrease in complexity and diversity over time due to microbial ...the community were enriched in ...
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Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies
... the community, based on sequenced bacterial and eukaryotic ribosomal genes, showed a gradual decrease in complexity and diversity over time due to microbial ...the community were enriched in ...
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
... in microbial community compo- sition and functional profiles reveal complex interactions among functional guilds and among wetland plants, microorganisms, and their ...and functional ...
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Taxon-Driven Functional Shifts Associated with Storm Flow in an Urban Stream Microbial Community
... protein-coding genes from ...between genes attributed to ...predicted genes (1 and 3 for the before- and after-rain metagenomes, respectively) had high identity matches ( ⬎ 90%) to known ...virulence ...
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The Induction of Oxalate Metabolism In Vivo Is More Effective with Functional Microbial Communities than with Functional Microbial Species
... the genes necessary for colonization and/or they might not be able to survive the transition to the gastrointestinal ...of microbial transplantation is antici- pated to be higher when the evolutionary ...
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Distinct Drivers of Core and Accessory Components of Soil Microbial Community Functional Diversity under Environmental Changes
... soil microbial communities. The vast functional gene repertoire of soil mi- crobial communities is composed of both core and accessory genes, which may be governed by distinct ...quantified ...
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Computational meta'omics for microbial community studies
... reconstruction Microbial communities can be seen not only as groups of individual microbes, but also as collections of biochemical functions affecting and responding to an environment or host ...the genes ...
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Phylogenetic approaches to microbial community classification
... identify functional as well as phylogenetic connections between OTUs and ...those genes that are frequently transferred, may yield a higher predictive ...
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Computational meta'omics for microbial community studies
... reconstruction Microbial communities can be seen not only as groups of individual microbes, but also as collections of biochemical functions affecting and responding to an environment or host ...the genes ...
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Functional stability and community dynamics during spring and autumn seasons over 3 years in Camargue microbial mats
... Camargue microbial mats was not significantly affected by seasonal changes at the studied location; however, there were differences among layers, especially between the 0–2 mm layer and the other two ...layers. ...
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Microbial Functional Responses to Cholesterol Catabolism in Denitrifying Sludge
... these community members might result from low concentrations of the growth substrate in their original environments (the cholesterol content was ...share functional redundancy in degradation of side chains ...
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