microsatellite loci
An Analysis of Microsatellite Loci in Arabidopsis thaliana: Mutational Dynamics and Application
... ICROSATELLITE loci are tandemly repeated Microsatellite loci increase and decrease in length DNA motifs of 1–6 bp in length; they are also due to polymerase slippage during DNA replication referred ...
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Cross species testing and utility of microsatellite loci in Indirana frogs
... tested loci were found to be poly- morphic in the two most divergent taxa, limiting the utility of these markers in studies of divergent Indirana ...the loci (IND107) was highly polymorphic in all taxa ...
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Characterization of microsatellite loci for an Australian epiphytic orchid, Dendrobium calamiforme, using illumina sequencing
... Nineteen microsatellite loci were identifi ed from an Illumina paired-end shotgun library of ...All loci were polymorphic with two to 14 alleles per locus, expected heterozygosity ranging from ...
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Transferability of heterologous microsatellite loci between species of Euterpe genus
... SSR loci between species has been observed in other palm ...SSR loci were developed and applied for the species of ...coconut loci (Cocus nucifera) to Butia odorata, 40% transferability was observed ...
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Evidence for Complex Mutations at Microsatellite Loci in Drosophila
... and microsatellite variability was compared with sequence ...7 loci had their size variation among species consistent with the occurrence of strictly stepwise mutations in the repeat array, the others ...
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Discovery and characterization of new microsatellite loci in Dipteryx alata Vogel (Fabaceae) using next-generation sequencing data.
... of microsatellite markers for native Cerrado species (Croft and Schaal, 2012; Soares et ...of microsatellite markers ...developed microsatellite loci has a high power of exclusion of false ...
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Conditional Genotypic Probabilities for Microsatellite Loci
... tance of the coancestry coefficient in the numerator locus (D8S7911) used in forensic profiling of New and make predicted match probabilities more similar Zealand caucasians. Further simulations explore the ef- to those ...
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Mutation and Evolution of Microsatellite Loci in Neurospora
... bilization of tracts of simple repetitive DNA in yeast by mutations Zhou, Z., M. Miwa and T. Hogetsu, 2001 Polymorphism of simple affecting DNA mismatch repair. Nature 365: 274–276. sequence repeats reveals gene flow ...
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Spectrum of Nonrandom Associations Between Microsatellite Loci on Human Chromosome 11p15
... different loci, or gametic disequilibrium, across extensive anonymous regions of the human genome is based on the analysis of overall disequilibrium between pairs of ...12 microsatellite loci (CA ...
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Isolation and Characterization of 26 Microsatellite Loci for the Shortfin Silverside Fish Chirostoma humboldtianum Valenciennes1835 (Atherinopsidae: Menidiinae) Derived from Next Generation Sequencing and Their Cross Amplification in Central Mexican Atherinopsids
... 26 Microsatellite Loci for the Shortfin Silverside Fish Chirostoma humboldtianum Valenciennes 1835 (Atherinopsidae: Menidiinae) Derived from Next Generation Sequencing and Their Cross-Amplification in ...
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Characterisation of a novel panel of polymorphic microsatellite loci for the liver fluke, Fasciola hepatica, using a next generation sequencing approach
... Thirty-five loci were selected for preliminary PCR screening, which resulted in 15 loci being taken forward for PCR amplification using a modified semi-nested PCR protocol based on Schuelke’s method (Schuelke, ...
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Development of microsatellite loci for two New World vultures (Cathartidae)
... Microsatellite loci have been developed for several Old World vulture species [8–11], yet only one New World vulture species, the critically endangered California con- dor (Gymnogyps californianus) ...
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An Evaluation of Evolutionary Constraints on Microsatellite Loci Using Null Alleles
... If these measures of the null series are significantly smaller or larger than those of the main series, the minimum evolutionary time of the series compared can be set to [r] ...
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Constraints on Allele Size at Microsatellite Loci: Implications for Genetic Differentiation
... these factors. Obviously, the sampling effects leading to genetic drift will be strongest when population size N is small. On the other hand, the inherent tendency to converg[r] ...
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Allele frequencies at microsatellite loci: the stepwise mutation model revisited.
... and it is this structure that could result in the different patterns found in the distributions of allele frequen- cies shown in Figure 1. Much more information will be neede[r] ...
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An evaluation of genetic distances for use with microsatellite loci.
... In this paper we first derive a distance measure that is linear with time when applied to loci undergoing a strict stepwise mutation process with no constraint on allele s[r] ...
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The characterisation of microsatellite markers reveals tetraploidy in the Greater Water Parsnip, Sium latifolium (Apiaceae)
... Microsatellite loci, expected and observed allele sizes (with the sequenced allele underlined*; bp) of individual from which the microsatellite sequences were isolated (individual I50, sampled at ...
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Microsatellites variation in sterlet sturgeon, Acipenser ruthenus from the Lower Danube
... seven microsatellite loci (LS-19, LS-34, LS-54, LS-57, LS-68, Aox23 and Aox45), originally isolated in North- American sturgeon ...seven loci, three (LS57, Aox23 and Aox45) have showed a tetrasomic ...
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A Genetic Linkage Map of the Hermaphrodite Teleost Fish Sparus aurata L.
... phic loci were obtained from the above libraries (GenBank accession ...Six microsatellite loci published by B atargias et ...a microsatellite repeat that were available in GenBank (AJ418632, ...
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Characterization of 33 microsatellite markers and development of multiplex PCR for yellow-throated marten (Martes flavigula)
... A total of 179 candidate microsatellite loci were selected for initial screening of polymorphisms in three individual yellow-throated martens. Forward primers were tagged at the 5′ end with either ...
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