mitochondrial genomes
Complete mitochondrial genomes of four entomopathogenic nematode species of the genus Steinernema
... Mitochondrial genomes were reconstructed from the Illumina reads using MITObim ...and mitochondrial fragments in the assembly were identified by BlastX using Caenorhabditis elegans ...
8
The mitochondrial genomes of 11 aquatic macroinvertebrate species from Cyprus
... identical mitochondrial contigs, with the expected exception being length variations in the high- ly repetitive and AT-rich regions, which are difficult to assemble with short ...all mitochondrial ...
6
Undetected antisense tRNAs in mitochondrial genomes?
... presumably only occasionally function in translation. They are expected to be, on average, less similar to reg- ular tRNAs, hence translational activity by these anti- sense tRNAs should be avoided. This will be termed ...
25
ABNORMAL MITOCHONDRIAL GENOMES IN YEAST RESTORED TO RESPIRATORY COMPETENCE
... A second proposal for the occurrence of abnormal mitochondrial genomes, and more consistent with the observation of segregation and persistence of the ab- normal trait, is[r] ...
14
Phylogenetic analysis of the mitochondrial genomes from Leber hereditary optic neuropathy pedigrees.
... The nucleotide sequences of the mitochondrial genomes from patients with Leber hereditary optic neuropathy (LHON) were used for phylogenetic analysis to study the origin and pop[r] ...
18
The functional organization of mitochondrial genomes in human cells
... eight genomes The number of mitochondrial genomes per focus was cal- culated after measuring the number of mitochondrial genomes per cell, the total mitochondrial length, and the ...
14
Likelihood Analysis of Asymmetrical Mutation Bias Gradients in Vertebrate Mitochondrial Genomes
... vertebrate mitochondrial genomes in a phylogeny-based likelihood ...the mitochondrial genome and to directly estimate relative substitution ...
12
Maternal ancestry and population history from whole mitochondrial genomes
... the mitochondrial clades. Due to the shallow coalescent time of mitochondrial TMRCA at approximately 100 to 200 thousand years (ky), mtDNA data have only limited power to inform us about the more distant ...
10
Complete DNA sequences of the mitochondrial genomes of the pathogenic yeasts Candida orthopsilosis and Candida metapsilosis: Insight into the evolution of linear DNA genomes from mitochondrial telomere mutants
... sequenced mitochondrial genomes are ...DNA genomes, ...linear mitochondrial genome. In order to compare mitochondrial telomeres from all three yeast spe- cies, we cloned and sequenced ...
10
Germline Bottlenecks and the Evolutionary Maintenance of Mitochondrial Genomes
... HE mitochondrial genome features a mode of re- chondria is limited ( Avise ...that mitochondrial genes have been shown to feature from that of the nuclear ...that mitochondrial genomes have no ...
12
Genetic and Biochemical Basis for Viability of Yeast Lacking Mitochondrial Genomes
... crude mitochondrial fraction through a 20% percoll-density gradient (Yaffe ...1991). Mitochondrial yield was determined with the Coomassie protein assay (Pierce, Rock- ford, ...
10
Mitochondrial Genomes Provide Insights into the Phylogeny of Lauxanioidea (Diptera: Cyclorrhapha)
... The mitochondrion (mt), one of the fundamental eukaryotic organelles, is descended from an alpha-proteobacterium as such it retains a remnant, bacterial-like genome [1–3]. The mt genome has been widely used as an ...
22
The mitochondrial genomes of two nematodes, Caenorhabditis elegans and Ascaris suum.
... protein, and tRNA genes are transcribed in opposite directions (ANDERSON et al. As in all other previously sequenced me- tazoan mtDNAs, none of the C. nucleotide sequence[r] ...
28
Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements
... The present study reports four findings worthy of em- phasis. First, on the basis of nucleotide diversity, dN/dS and average sequence identity, we propose that nad2, nad5 and nad4 genes are better-suited as molecular ...
13
Contrasting Patterns of Nonneutral Evolution in Proteins Encoded in Nuclear and Mitochondrial Genomes
... (25/31) mitochondrial genes, this pattern is seen in fewer than half (15/36) of the nuclear data ...between mitochondrial and nuclear genetics (we varied recombination rate, population size, mutation rate, ...
15
The Role of Selection in the Evolution of Human Mitochondrial Genomes
... Phylogenetic and statistical analyses: An unrooted tree from a median-joining network (B andelt et al. 1999) was drawn and labeled following existing mtDNA haplogroup nomenclature (T orroni et al. 1996, 2001; M acaulay ...
15
A model simulating the dynamics of plant mitochondrial genomes.
... Indeed, some sequences disappeared when all circles had the same amplification rates (whereas in the de- terministic model, the loss of sequences was only ob- tained wh[r] ...
10
MITOCHONDRIAL GENETICS IX: A MODEL FOR RECOMBINATION AND SEGREGATION OF MITOCHONDRIAL GENOMES IN SACCHAROMYCES CEREVISIAE
... and always taking the same direction. Such a process produces as many parental as recombined molecules i a each mating round, but only one type of recombi- nants, the major type[r] ...
23
Next generation sequencing profiling of mitochondrial genomes in gout
... In past research, genome-wide association studies (GWAS) were performed to explore a number of nuclear loci associated with various complex diseases, including gout [5]. However, nuclear loci identified in GWAS col- ...
13
Tick mitochondrial genomes: structural characteristics and phylogenetic implications
... mt- genomes were published in this decade, and are from 3 families and 15 genera, including 35 species in the fam- ily Ixodidae: Ixodes (7 species); Amblyomma (7 species); Rhipicephalus (5 species); Rhipicentor (1 ...
15