Phosphorylation sites
Analysis of phosphorylation sites of herpes simplex virus type 1 ICP4.
... several sites of ...the sites of phosphorylation on ICP4, but the results from two-dimen- sional phosphopeptide mapping of the wt and n208 ICP4 pro- teins indicate that most of the ...
11
An ensemble method approach to investigate kinase-specific phosphorylation sites
... specific phosphorylation sites in vertebrates ...protein phosphorylation sites and may serve as an important complement to existing ...
15
Mutation of Capsid Protein Phosphorylation Sites Abolishes Cauliflower Mosaic Virus Infectivity
... II phosphorylation target consensus sequence is S/TXXD/E, with additional D or Es at positions ⫺1, ⫹1, ⫹2, ⫹4, and ⫹5 increasing its quality and R, K, or Hs at position ⫺1 decreasing its ...CP44 ...
5
Antibody Like Phosphorylation Sites in Focus of Statistically Based Bilingual Approach
... phoshorylation sites encoded by ...predicted phosphorylation sites, which were represented here by the products of their maximum predicted scores ...
22
Charge environments around phosphorylation sites in proteins
... of phosphorylation in yeast are consistent with strong preferences of kinases for specific substrates, but also indicate that predictions based on phosphorylation site patterns can lead to substantial over- ...
12
Identification and Characterization of MAPK Phosphorylation Sites in Runx2
... stimulated phosphorylation and transcriptional activity of ...vitro phosphorylation of Runx2 was also ...MAPK phosphorylation sites (SP or TP) located at 282(S), 301(S), 319(S), and 326(T), ...
83
Glucose induced phosphorylation of the insulin receptor Functional effects and characterization of phosphorylation sites
... major phosphorylation sites in response to phorbol ester treat- ment (12, ...to phosphorylation at these sites, then removal of these sites would block the attenuation of in- sulin ...
9
PredPhos: an ensemble framework for structure-based prediction of phosphorylation sites
... keep phosphorylation site prediction far away to be perfectly ...that phosphorylation sites may be closely related with its structural conformations and, further- more, affected by the specific ...
11
PhosphoRice: a meta-predictor of rice-specific phosphorylation sites
... predict phosphorylation sites in rice phosphoproteins ...different phosphorylation sites datasets to test the perfor- mance of different ...protein phosphorylation sites by ...
9
Prediction of phosphorylation sites based on the integration of multiple classifiers.
... As shown in Table 2, three kinds of classification models were tested, which all use the same feature extraction method. Comparison of the performance of the three classification models showed that the prediction results ...
9
Analysis of protein phosphorylation sites using affinity enrichment and mass spectrometry
... distinct sites, and phosphorylation by a particular kinase at specific sites may influence further phosphorylation, dephosphorylation and degradation events (Bech-Otschir, 2002; Cohen, ...
307
Aldehyde dehydrogenase 2 activation and coevolution of its εPKC-mediated phosphorylation sites
... translational phosphorylation of the ...32]; phosphorylation of ALDH2 by ε PKC increases metabolism of toxic aldehydes, including ...for phosphorylation- induced activation of the enzyme is not ...
12
Using multitask classification methods to investigate the kinase-specific phosphorylation sites
... predicting phosphorylation sites have been reported ...a phosphorylation site or not, while kinase-specific methods can not only predict whether it is a phosphorylation site but also assign it ...
8
Interaction of hookworm 14 3 3 with the forkhead transcription factor DAF 16 requires intact Akt phosphorylation sites
... sequence-specific sites mediates its interaction with the ...conserved phosphorylation sites (Ser59 and Ser65) that are substrates for several kinases in mammals, including Akt and protein kinase C ...
13
Phosphorylation Status of the Parvovirus Minute Virus of Mice Particle: Mapping and Biological Relevance of the Major Phosphorylation Sites
... A major result derived from this study was the finding that the two types of protein subunits occupying equivalent posi- tions in the T⫽1 MVMp capsid show distinct patterns of phos- phorylation. Phosphopeptides D to O ...
11
Abelson murine leukemia virus P120: identification and characterization of tyrosine phosphorylation sites.
... STEPHENSON"* Laboratory of Viral Carcinogenesis, National Cancer Institute-Frederick Cancer Research Facility,1 and Carcinogenesis Intramural Program, Frederick Cancer Research Facility,[r] ...
5
Metabolic turnover of phosphorylation sites in simian virus 40 large T antigen.
... Thus, for all lysates, the total 32P radioactivity incorporated in 88K large T molecules 0 is shown, as well as the 32p radioactivity associated with the N-terminal P-Ser site l, the N-t[r] ...
5
Improved localization of phosphorylation sites in simian virus 40 large T antigen.
... Amino acid sequence analysis of fragments generated by partial proteolysis from large simian virus 40 tumor antigen.. Binding of dephosphorylated A protein to SV40 DNA.[r] ...
17
Phosphorylation sites of the E2 transcriptional regulatory proteins of bovine papillomavirus type 1.
... Only a minimal level of phosphate labeling was observed in both the E2 and E2-TR polypeptides expressed from vSBE2kZRNGS4, suggesting that the sequence replaced by the synthetic epitope [r] ...
10
Rotavirus NSP5: Mapping Phosphorylation Sites and Kinase Activation and Viroplasm Localization Domains
... shown). Phosphorylation and the capacity to activate the cellular kinase(s) appear to be distinct characteristics of ...abolished phosphorylation of the protein expressed in vivo (see below), did not affect ...
10