QTL and Candidate Genes
Identification of QTL and candidate genes for Pb accumulation in maize at maturity stage
... identifying genes of QTL intervals With a relatively high mapping resolution, the QTLs which could explain over 10% for the pheno- typic variation and co-localized on same genomic regions were used to ...
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Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes
... 2012). Genes related to volatile regulation were identified and were mapped when polymorphism was ...These genes were distributed across all seven Rubus linkage groups (LG) ...volatile QTL varied ...
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Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes
... 2012). Genes related to volatile regulation were identified and were mapped when polymorphism was ...These genes were distributed across all seven Rubus linkage groups (LG) ...volatile QTL varied ...
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Genome-Wide Association Study Identifies QTL and Candidate Genes Governing Seed Mucilage Content and Hull Content in Flax (Linum usitatissimum L.)
... four QTL for MC and HC, ...three QTL harboring promising candidate genes for ...the QTL associated with HC contained plausible candidate genes related to seed coat and ...
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Analysis of candidate genes of QTL and chromosomal regions for essential hypertension in the rat model
... to genes, we identified 266 essential hyperten- sion-associated genes (HyperA), and 83 of these genes contain known hypertension-associated polymorphi- sms ...HyperAP genes have been ...
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QTL mapping and candidate genes for resistance to Fusarium ear rot and fumonisin contamination in maize
... the QTL interval, three candidate genes (including YPTM1) showed sig- nificantly higher constitutive expression in the resistant line in comparison to the susceptible ...other genes were ...
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Using microarrays to identify positional candidate genes for QTL: the case study of ACTH response in pigs
... about candidate genes under the QTL that could be tested ...positional candidate genes for the ...and QTL studies that is portable to other non-model ...
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Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.)
... 12 candidate genes identified using high density QTL mapping and gene enrichment analysis in control and stressed root tissues of ICC 4958 and ICC 1882 ...genotypes. QTL and gene enrichment ...
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Do Quantitative Trait Loci (QTL) for a Courtship Song Difference Between Drosophila simulans and D. sechellia Coincide With Candidate Genes and Intraspecific QTL?
... six QTL that explain a total of ...Three candidate genes are located in the intervals bounded by two of the QTL and there are no significant QTL on the X ...
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Validation of QTL mapping and transcriptome profiling for identification of candidate genes associated with nitrogen stress tolerance in sorghum
... or genes relevant to important ...the candidate genes underlying the QTLs responsible for traits of ...a QTL is to search for physically-proximate genes with annotations or gene ...
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Combining meta-QTL with RNA-seq data to identify candidate genes of kernel row number trait in maize
... to QTL mapping of important ag- ronomic traits, the gene cloning could be more useful to understand the molecular mechanism and genetic improvement of a trait, which is also the foundation of breeding by ...
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Genetic analysis of flag leaf size and candidate genes determination of a major QTL for flag leaf width in rice
... major QTL for FLW, was fine mapped within ...Two candidate genes were finally selected based on difference in genomic se- quence and transcriptional ...
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Identification of novel candidate genes involved in resistance against a fungal pathogen in Drosphila melanogaster using the DSPR and QTL analysis
... my QTL, it is possible that I have false positives among the candidate genes that I ...18 QTL contained no protein coding genes, and 1 of them contained a ...15 QTL with protein ...
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Prioritization of Candidate Genes in QTL Regions for Physiological and Biochemical Traits Underlying Drought Response in Barley (Hordeum vulgare L.)
... positional candidate genes identified within QTL confidence intervals with respect to the experiment variants (C, D, DSI) for all traits (A) and for the considered trait categories: plant water ...
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Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
... several genes. We aimed to identify candidate genes involved in fruit softening rate by integrating quantitative trait loci (QTL) and expression QTL (eQTL) analyses, comparing siblings ...
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QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea
... density. QTL-seq approach, therefore, was used to identify candidate genomic regions for 100-seed weight (100SDW) and total dry root weight to total plant dry weight ratio (RTR) under rainfed ...putative ...
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Identification of QTL and candidate genes for plant density tolerance in maize
... Grain yield is a complex trait determined by many other underlying traits. QTL for some of these underlying traits, such as flowering time, plant height, and ear height (Veldboom et al., 1994), ASI (Buckler et ...
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Genome-Wide Association Study Identifies QTL and Candidate Genes Governing Seed Mucilage Content and Hull Content in Flax (Linum usitatissimum L.)
... Box plots illustrating the phenotypic differences between flaxseed accessions carrying different alleles of the SNPs associated with mucilage content and hull conte[r] ...
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An Expression QTL of Closely Linked Candidate Genes Affects pH of Meat in Chickens
... a QTL on GGA4 for body weight in a broiler 3 layer cross (Cabrera et ...expressed genes across the genome with no particular en- richment in the QTL region and only one reasonably signif- icant ...
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High-resolution QTL mapping for grain appearance traits and co-localization of chalkiness-associated differentially expressed candidate genes in rice
... Broman KW, Wu H, Sen Ś , Churchill GA (2003) R/qtl: QTL mapping in experimental crosses. Bioinformatics 19:889 – 890 Calingacion M, Laborte A, Nelson A, Resurreccion A, Concepcion JC, Daygon VD, Mumm R, ...
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