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Samples and species identification

Microsporidial keratitis in India: 16S rRNA gene-based PCR assay for diagnosis and species identification of microsporidia in clinical samples

Microsporidial keratitis in India: 16S rRNA gene-based PCR assay for diagnosis and species identification of microsporidia in clinical samples

... the species of microsporidia cannot be deter- mined by these staining ...the species level, in both clinical and environmental sample matrices, has been lacking to ...and species ...

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A novel LC–MS method using collagen marker peptides for species identification of glue applicable to samples with multiple animal origins

A novel LC–MS method using collagen marker peptides for species identification of glue applicable to samples with multiple animal origins

... artworks. Identification of the animal source of glue is important not only to understand the artistic technique and historical background, but also to conduct appropriate treatment for restoration and ...

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Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods

Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods

... In the present study, we focus on metabarcoding zoo- plankton using the hypervariable V4 region of the 18S rRNA gene, a region prone to expansion and contraction via slippage mutations and characterized by great length ...

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Identification and Susceptibility Testing on Samples of Mycobacterium spp

Identification and Susceptibility Testing on Samples of Mycobacterium spp

... 3 Internal Medicine Department, Botucatu Medical School, Sao Paulo State University, UNESP, Brazil. Authors’ contributions This work was carried out in collaboration between all authors. Author RAOC designed the study, ...

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Identification of Paecilomyces variotii in Clinical Samples and Settings

Identification of Paecilomyces variotii in Clinical Samples and Settings

... Species identification of fungi in the past has primarily been based on morphological ...However, identification solely on the basis of morphology appears to be difficult, and trained staff is ...

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Molecular identification of aflatoxigenic Aspergillus species in feedstuff samples

Molecular identification of aflatoxigenic Aspergillus species in feedstuff samples

... Article type: Original article Background and Purpose: Aflatoxins are naturally produced by some species of Aspergillus, such as A. flavus and A. parasiticus. Aflatoxins reportedly have carcinogenic effects on ...

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Molecular Method for Identification of Rickettsia Species in Clinical and Environmental Samples

Molecular Method for Identification of Rickettsia Species in Clinical and Environmental Samples

... We thank Michele Herna ´ndez Cabrera from the Hospital Insular de Gran Canaria, Jose ´ Antonio Oteo from the Hospital de La Rioja, and Jose ´ Ignacio Herrero from the Hospital Los Montalvos, Salamanca, Spain, for ...

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Distribution of Nocardia Species in Clinical Samples and Their Routine Rapid Identification in the Laboratory

Distribution of Nocardia Species in Clinical Samples and Their Routine Rapid Identification in the Laboratory

... total identification time for the five species was, on average, 5 days ...of species involved in ...routine identification of the most relevant species in the labo- ...some ...

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Detection and Identification of Entamoeba Species in Stool Samples by a Reverse Line Hybridization Assay

Detection and Identification of Entamoeba Species in Stool Samples by a Reverse Line Hybridization Assay

... Department of Parasitology, Leiden University Medical Centre, Leiden, The Netherlands Received 28 May 2003/Returned for modification 16 July 2003/Accepted 14 August 2003 Classically, detection of Entamoeba histolytica is ...

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27. Isolation & identification of Shigella species from food and water samples of Quetta, Pakistan

27. Isolation & identification of Shigella species from food and water samples of Quetta, Pakistan

... Shigella species are frequently associated with food and water borne infections leading to acute invasive enteric ...Shigella species from food and water ...100 samples (50 ready-to-eat salad + 50 ...

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Molecular identification of zoonotic and livestock specific Giardia species in faecal samples of calves in Southern Germany

Molecular identification of zoonotic and livestock specific Giardia species in faecal samples of calves in Southern Germany

... livestock-specific species Giardia bovis is the most frequently observed in cattle, however, the two zoonotic species Giardia duodenalis and Giardia enterica have also been ...

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Identification of Pathogenic Rare Yeast Species in Clinical Samples: Comparison between Phenotypical and Molecular Methods

Identification of Pathogenic Rare Yeast Species in Clinical Samples: Comparison between Phenotypical and Molecular Methods

... Aspergillus species are the most com- mon causes of invasive fungal infection (IFI) in debilitated individuals, almost all yeasts are potential pathogens, causing great morbidity and mortality in those patients ...

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Identification and quantification of fumonisin-producing Fusarium species in grain and soil samples from Egypt and the Philippines

Identification and quantification of fumonisin-producing Fusarium species in grain and soil samples from Egypt and the Philippines

... and species-specific PCR reactions are commonly used to clearly identify species within these ...producing species in maize, wheat and soil samples from Egypt and the Philippines, and to test ...

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Candida SPECIES DISTRIBUTION IN CLINICAL SAMPLES

Candida SPECIES DISTRIBUTION IN CLINICAL SAMPLES

... besides epidemiological pattern change, there is an increase of candida spp. resistant to conventional therapy (cappelletty e eiselstein-mckitrick, 2007; Fidel et al., 1999; Filioti et al., 2007; kakabadze et al., 2008; ...

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Molecular identification of Fusarium species complex isolated from clinical samples and its antifungal susceptibility patterns

Molecular identification of Fusarium species complex isolated from clinical samples and its antifungal susceptibility patterns

... Fusarium species are grouped into approximately 23 species complexes out of which around 70 are involved in human ...these species has undergone considerable changes in recent years. These ...

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A multiplex nested PCR for the detection and identification of Candida species in blood samples of critically ill paediatric patients

A multiplex nested PCR for the detection and identification of Candida species in blood samples of critically ill paediatric patients

... blood samples from patients with negative cultures can be related to transient episodes rather than true candidaemia, the finding of a positive PCR in a critically ill patient should be strongly considered due to ...

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Molecular Identification of Campylobacter Species from Positive Cultural Stool Samples of Diarrhoeic Children in Osun State

Molecular Identification of Campylobacter Species from Positive Cultural Stool Samples of Diarrhoeic Children in Osun State

... pylobacter species have been reported as one of the causal agents, Campy- lobacter spp ...five samples were amplified by PCR out of 57 Campylobacter strains that were positive for cultural methods from 815 ...

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Article: Identification and antibiogram study of bacterial species isolated from milk samples of different locations in Bangladesh

Article: Identification and antibiogram study of bacterial species isolated from milk samples of different locations in Bangladesh

... milk samples (n=35) of different locations and to determine their sensitivity to different ...milk samples were collected and transported aseptically and subsequently allowed for culture in bacteriological ...

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Identification of the Plasmodium species in clinical samples from children residing in five epidemiological strata of malaria in Cameroon

Identification of the Plasmodium species in clinical samples from children residing in five epidemiological strata of malaria in Cameroon

... Plasmodium species including ...Plasmodium species in clinical samples from children residing in five epidemiological strata of malaria in Cameroon, so as to advise control ...

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MALDI TOF mass spectrometry and identification of new bacteria species in air samples from Makkah, Saudi Arabia

MALDI TOF mass spectrometry and identification of new bacteria species in air samples from Makkah, Saudi Arabia

... air samples collected around the slaughterhouses used during the ...air samples on three days from four different sites: slaughterhouses at Al-Kakia, Al-Meaisim and Al-Sharaia, and from a waste disposal ...

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