SSR Markers
DNA fingerprinting of groundnut (Arachis hypogaea L.) varieties of Tirupati using SSR markers
... The SSR markers Seq16G8 produced unique alleles for Tirupati 3 (195bp) and Prasuna ...with SSR markers Seq5D5 and PM3 were unique in Dharani with respect to allele at 267bp and 225 bp ...with ...
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Genetic Diversity of the N’Dama Breed in Mali Using SSR Markers
... Abstract: The N'Dama race, trypanotolerant and well adapted to the climatic conditions of Mali, is threatened of disappearance by the introduction of other genes by means of the artificial insemination with the exotic ...
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Developmenrt of EST SSR and genomic SSR markers to assess genetic diversity in Jatropha Curcas L
... Five J. curcas accessions, which corresponded to JI-1 (Indonesia), JA-1(America), JG-1 (Grenada), JYC-1(Yun- nan, China), and JHC-1(Hainan, China), were used to test the suitability of the cassava SSR ...
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Molecular characterization of Turkish onion germplasm using SSR markers
... molecular markers were used for the first time to study the genetic diversity of Turkish onion (Allium cepa ...these markers, out of which 303 were ...46 SSR markers were convenient and ...
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First Report of a set of Genetic Identities in Prunus Rootstocks by SSR Markers
... molecular markers such as RAPD (14, 21); ISSR (3, 8); SCAR (12, 14); AFLP (13, 17, 18) and SSR (5, 6, 7, 10, 12, 22, 23) have been extensively used in Prunus rootstocks in order to the germplasm ...
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Intra-Cultivar Variability Endorsed by SSR Markers in Mango
... of SSR markers was clear with Dashehari clones, as one mislabeled clone Dashehari C3, ...Thus, SSR markers were not only able to confirm genetic similarity in Dashehari and Chausa clones, and ...
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ISSR and SSR markers for determining genetic relationships among three wild species of Passiflora
... Among the 23 SSR primers tested, 18 were considered as polymorphic, which is equivalent to a transferability rate of 95.65% (Table 2). This was an expected result, since the study species belong to the same genus; ...
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Molecular diversity analysis in Wheat genotypes using SSR markers
... present, SSR is one of most promising molecular markers which are able to identify or differentiate genotypes within a ...of SSR markers the present research work was carried out to study ...
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Development and Characterization of SSR Markers in Proso Millet Based on Switchgrass Genomics
... polymorphic markers (181 out of 254) produced 2, 3 or 4 alleles and 73 markers have produced 1, 5, 6, 7 or 8 ...each SSR marker on the set of 8 lines ranged from 1 ...of SSR markers ...
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Segregation Correlation of SSR Markers and Flower Traits in Aneuploid Tobacco
... A total of 20 primer pairs were screened to genotype both the progenitors and 220 progeny plants. A typical amplification profile is shown in Figure 5. All to- gether, 42 polymorphic SSR markers was ...
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Development and validation of the first SSR markers for Mimosa scabrella Benth.
... capillary electrophoresis validation with leaf DNA of 33 adult and 411 progeny individuals. Polymorphic locus percentage was 36, 4 in 11 loci, 3 chloroplast SSRs, and 1 nuclear SSR. Allele number of polymorphic ...
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Simple sequence repeat (SSR) markers linked to drought tolerant traits in selected Sudanese rice (Oryza sativa L.) genotypes
... polymorphic markers enabling precise classification of the cultivars (Sonia, ...molecular markers to select accessions possessing genes and genomic regions that control target traits can fast-track the ...
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Effective Procedure for Development of EST SSR Markers Using cDNA Library
... The present study was conducted to develop EST-SSR markers using the cDNA library from rice plant. Total RNA ex- tracted from the leaves of brown plant hopper resistance gene originated from a rice cultivar ...
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Genetic diversity study of pigeon pea (Cajanus cajan (L.) Millsp.) genotypes using SSR markers
... genotypes and estimation of genetic diversity. Keeping the above aspects in view, characterization and genetic diversity studies were conducted in selected pigeonpea genotypes using SSR markers. Materials ...
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In silico search, characterization and validation of new EST SSR markers in the genus Prunus
... Results: A total of 316 SSRs were identified using MISA software. Dinucleotide SSR motifs (26.31 %) were found to be the most abundant type of repeats, followed by tri‑ (14.58 %), tetra‑ (0.53 %), and penta‑ (0.27 ...
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Transferability of heterologous SSR Markers to cotton genotypes
... Thus, extent of transferability of cross genera SSR markers to cotton depends on their number and nature of repeat motifs. Chandra (2011) reported tranferability of Medicago truncatula EST-SSR ...
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RESEARCH NOTENew SSR Markers for Use in Cotton (Gossypium spp.) Improvement
... SSR markers can be effectively utilized to characterize the vast germplasm resources of Gos- sypium ...DNA markers that are cost effective to analyze in cotton breed- ing ...DNA markers be ...
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Identification of Linked Markers for Delayed Fruit Ripening in Tomato Using Simple Sequence Repeat (SSR) Markers
... conditions were monitored regularly. All the plants were recorded for time of fruit ripening by synchronizing the flowering time and there was a clear differentiation in the expression of the phenotype. Phenotype for ...
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Development and characterization of novel set of polymorphic SSR markers for Dill (Anethum graveolens L.)
... Distribution and Frequency of Microsatellites The investigation for microsatellites in 14,651 Dill EST and genomic sequences was carried out for the present study. In Anethum graveolens a total of 1556 SSRs were found ...
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Characterization of variable EST SSR markers for Norway spruce (Picea abies L )
... (Applied Biosystems, Foster City, California, USA) and allele calls were manually performed in Excel. The test- ing population was only used to test for polymorphic loci and was not included in further calculations. Num- ...
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