The intergenic region
RNA footprint mapping of RNA polymerase II molecules stalled in the intergenic region of polyomavirus DNA.
... DISCUSSION Polyomavirus large T antigen is capable of blocking elonga- tion by RNA polymerase II in vivo when bound to site A in the intergenic region of polyomavirus DNA. In this report, we present an ...
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Mutation of large T-antigen-binding site A, but not site B or C, eliminates stalling by RNA polymerase II in the intergenic region of polyomavirus DNA.
... Stalling of RNA polymerases by large T antigen bound to the intergenic region of viral DNA may function to prevent transcription from displacing proteins whose binding is required for th[r] ...
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Putative origin and function of the intergenic region between COI and COII of Apis mellifera L. mitochondrial DNA.
... any counterpart in Drosophila yakuba mitochondrial DNA (mtDNA), arose by tandem duplication. The usual location of length variation in mtDNA control regions prompted[r] ...
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Mutational Analysis of the Varicella-Zoster Virus ORF62/63 Intergenic Region
... ORF62/63 intergenic region was cloned between the Renilla and firefly luciferase genes, which acted as reporters of ORF62 and ORF63 transcription, and recombinant viruses were generated that carried these ...
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Behçet’s disease risk association fine mapped on the IL23R–IL12RB2 intergenic region in Koreans
... IL23R–IL12RB2 intergenic SNP rs1495965 was significantly associated with BD risk (OR (95% CI) = ...the intergenic region rather than the two flanking genes, as rs1495966 and rs4655535, almost ...
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From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa
... the intergenic region formed by a P ele- ment (which vary in sequence and length) com- bined with a variable number of Q elements (which also vary in sequence and length) suggests a complex mode of ...
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Mutagenic analysis of the coronavirus intergenic consensus sequence.
... pentanucleotide repeats at the 5'-end genomic leader se- quence and at the intergenic region are the same sequence, the precise leader-body fusion site on MHV mRNA has not been identifie[r] ...
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Sequence Elements in both the Intergenic Space and the 3′ Untranslated Region of the Crithidia fasciculata KAP3 Gene Are Required for Cell Cycle Regulation of KAP3 mRNA
... mRNA levels of several Crithidia fasciculata genes involved in DNA metabolism have previously been found to cycle as cells progress through the cell cycle. Octamer consensus sequences in the 5 ⴕ untranslated regions (5 ⴕ ...
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An Intergenic Region Shared by At4g35985 and At4g35987 in Arabidopsis Thaliana is a Tissue Specific and Stress Inducible Bidirectional Promoter Analyzed in Transgenic Arabidopsis and Tobacco Plants
... of intergenic regions in which cis-regulatory elements are likely to be located ...short intergenic distance, and oriented in divergent transcriptional configuration, are prevalent and conserved in many ...
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Analysis of a new strain of Euphorbia mosaic virus with distinct replication specificity unveils a lineage of begomoviruses with short Rep sequences in the DNA B intergenic region
... the intergenic region of its DNA-B, whose position and arrangement is conserved in several begomovirus spe- cies, hence suggesting the intriguing possibility of a functional role of those atypical sequences ...
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Dual Role of the Lymphocytic Choriomeningitis Virus Intergenic Region in Transcription Termination and Virus Propagation
... Daniel D. Pinschewer,† Mar Perez, and Juan Carlos de la Torre* Department of Neuropharmacology, The Scripps Research Institute, La Jolla, California Received 11 August 2004/Accepted 22 November 2004 Each genome segment ...
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Intramolecular recombination in polyomavirus DNA is a nonconservative process directed from the viral intergenic region.
... That both products of LR, L and R, were always detectable in similar amounts, even though the R product was unable to specify full-size viral early proteins (Fig. 3A), was consistent wit[r] ...
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Potential Limitations of the 16S 23S rRNA Intergenic Region for Molecular Detection of Bartonella Species
... gene intergenic transcribed spacer (ITS) region has been proposed as a rapid and reliable method for the detection of Bartonella species DNA in clinical ...ITS region, multiple PCRs or additional ...
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High-Frequency Intragenomic Heterogeneity of the Ribosomal DNA Intergenic Spacer Region in Trichophyton violaceum
... is unique in the genus Trichophyton. Analysis of a small num- ber of Iranian isolates suggested that this variation was inde- pendent of the geographical site of isolation of the T. viola- ceum strains. Although T. ...
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Analysis and prediction of exon, intron, intergenic region and splice sites for A thaliana and C elegans genomes
... distinguishing intergenic region from intron should be very useful to understand the features of the noncoding and regulatory ...and intergenic DNA at the meanwhile is very helpful for gene ...from ...
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Single nucleotide mutations of intergenic and intragenic region in mitochondrial genome from different individuals from Papua Indonesia
... coding region between genes in human mitochondrial genes and gene control regions using mitochondrial genome amplification ...the region HVS1 and HVS2 D-loop mtDNA ie in regions between ...coding ...
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A PCR Based Intergenic Spacer Region Capillary Gel Electrophoresis Typing Method for Identification and Subtyping of Nocardia Species
... While only a minority (8/19; 42%) of the dif- ferent Nocardia species contained isolates displaying unique fragment sizes that were predictive of a particular species, virtually all isol[r] ...
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Analysis of TNFAIP3, a feedback inhibitor of nuclear factor κB and the neighbor intergenic 6q23 region in rheumatoid arthritis susceptibility
... 6q23 region have yielded multiple independent association signals, including polymorphisms in the TNFAIP3 gene ...this region contains multiple genetic factors shared by RA and ...
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Epidemiology of vampire bat transmitted rabies virus in Goiás, central Brazil: re evaluation based on G L intergenic region
... 619-nt region containing the partial glycoprotein gene and the G-L intergenic region, and indicated that the isolates can be further divided into several phylogenetic lineages with signifi- cant ...
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Identification of Clinically Relevant Nonhemolytic Streptococci on the Basis of Sequence Analysis of 16S 23S Intergenic Spacer Region and Partial gdh Gene
... ITS region was performed with 57 NHS reference or clinical ...ITS region, as was also proven by phylogenetic ...ITS region and the partial gdh gene can be used in the reference laboratory for the ...
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