[PDF] Top 20 Identification of Individuals in a DNA Mixture Using SNP Markers
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Identification of Individuals in a DNA Mixture Using SNP Markers
... a mixture of up to ten contributors, different numbers of independent SNPs and varying minor allele ...person mixture, and this will not ...the mixture; I shall extend it to look at ... See full document
9
Identification and separation of DNA mixtures using peak area information
... The network class marker in Figure 10 is an upper level network containing several instances of the classes defined above. This class is made to repre- sent information related to a particular marker. Here it is ... See full document
46
Exploitation of Concatenated Olive Plastome DNA Markers for Reliable Varietal Identification for On Farm Genetic Resource Conservation
... polymorphic markers [21]. Using this information we set out to find the most variable regions with high resolv- ing power that can be used to identify the olive plants at variety ...respectively ... See full document
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Genetic analysis of an elite super-hybrid rice parent using high-density SNP markers
... associated DNA) (Baird et ...781 individuals required only four days, which shows the dramatic high-throughput potential of this ...genetic markers for ...of DNA frag- ments can get enough ... See full document
15
Data in support of genetic architecture of glucosinolate variations in Brassica napus
... [10], using the methods described in [11]. SNP positions were excluded from the alignment if they have a read depth below 10, a base call quality below Q20, missing data below ...in SNP ... See full document
12
Development of a core SNP arrays based on the KASP method for molecular breeding of rice
... ferent DNA templates. For KASP tests, a SNP- or Indel-specific KASP assay mixture (specific primer mix- ture), KASP Master Mix (general mixture) and DNA samples are mixed together for ... See full document
18
DNA Markers Evaluation to Preparing a Genetic Database for Identification in Crimes and Incidents
... Thus, DNA specimens extracted from an unidentified specimen must be matched with specimens of all families of missing individuals, and this is a very time-consuming ...for individuals working in ... See full document
5
MORPHOLOGICAL VARIABILITY OF INDONESIAN RICE GERMPLASM AND THE ASSOCIATED SNP MARKERS
... significant SNP markers were detected, such as TBGI367899 locus in chromosome 9 associated with leaf blade pubescence, id2000096 with flag leaf angle, TBGI118590 with leaf length, and both TBGI272460 and ... See full document
11
Molecular identification of variety purity in a cotton hybrid with unknown parentage using DNA-SSR markers.
... Five pairs of primers showing non-co-dominance were used for amplification in the F2 population. The results showed stable band spectra but with variation among individuals. Twelve pairs of primers with ... See full document
8
Identification of QTLs for grain yield and some agro-morphological traits in sunflower (Helianthus annuus L.) using SSR and SNP markers
... (SNP) markers have gained substantial attention in sunflower studies (Tang et ...bp) DNA sequences. The desirable features of SSR markers include their easy use, high information content, ... See full document
20
An R package for SNP marker-based parent-offspring tests
... of SNP markers assayed on these advanced genotyping platforms, monomorphic marker loci could be used to detect outcrossing or seed mixture of individuals and possible genotyping errors dur- ... See full document
5
SNP detection using RNA-sequences of candidate genes associated with puberty in cattle.
... approaches using sequences from Brangus heifers, the VEP tool was used to predict the effect of the variation on the protein as per the intra-gene locus of the 1157 SNPs (Figure ...from SNP discovery ... See full document
17
Genetic Mapping in a Natural Population of Collared Flycatchers (Ficedula albicollis): Conserved Synteny but Gene Order Rearrangements on the Avian Z Chromosome
... chicken domestication may have led to the evolution of a higher rate of recombination compared to other birds. Conserved gene markers: The idea of systematic use of evolutionarily conserved exonic primers spanning ... See full document
10
Evaluation of HIV DNA and inflammatory markers in HIV infected individuals with different viral load patterns
... The association between HIV-DNA and residual viremia was confirmed by logistic regression analysis (p = 0.003) adjusting for age, sex, type of antiretroviral regimen, cART duration, stage of disease, levels of ... See full document
7
DNA barcoding of flat oyster species reveals the presence of Ostrea stentina Payraudeau, 1826 (Bivalvia: Ostreidae) in Japan
... In general, Ostreidae species are economically import- ant marine organisms, but their morphological plasticity can cause taxonomic confusion. For example, shell morphology has been used as a primary feature to dis- ... See full document
10
Microgeographical structure in the major Neotropical malaria vector Anopheles darlingi using microsatellites and SNP markers
... extracted using ReliaPrep™ Blood gDNA kit (Promega, Madison, USA) and its concentration was estimated using a Qubit fluorometer (Invitrogen, Carlsbad, ...genomic DNA with EcoRI-MspI restric- tion ... See full document
8
The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers
... Core genome SNP phylogeny. To understand the phyloge- netic structure of the Burkholderia genus, genomes sequenced in this study, as well as GenBank reference genomes (see Table S2 in the supplemental material), ... See full document
9
Database mining for selection of SNP markers useful in admixture mapping
... autosomal SNP studies have highlighted significant patterns of structure within Europe along a north-south axis [37] and also the presence of several sig- nificant axes of stratification within Europe, most promi- ... See full document
8
Benefits of linking civil registration and vital statistics with identity management systems for measuring and achieving Sustainable Development Goal 3 indicators
... Similarly, estimates of the maternal mortality ratio (MMR) or under-five mortality for most countries are generated using data from population-based surveys. Al- though the sources of data and methods of ... See full document
5
Molecular Study of the Genetic Variability of Pumpkins Landraces from Brazilian Amazon
... Other molecular studies with genetic markers have also indicated the exis- tence of variability between and within the accesses collected at the different sites investigated. For example, C. moschata collected in ... See full document
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