[PDF] Top 20 A systematic genome-wide analysis of zebrafish protein-coding gene function
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A systematic genome-wide analysis of zebrafish protein-coding gene function
... each protein-coding ...known protein-coding ...of protein-coding genes by sequencing ~8000 F1 ...high-throughput, systematic phenotypic analysis of alleles to ... See full document
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Systematic review of genome wide gene expression studies of bipolar disorder
... lmer function from the lme4 package [36] in R with default parameters to fit the mixed-effects ...each gene were stored as output from each of the ...each gene with respect to pooled effect size/fold ... See full document
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Genome-Wide Mutagenesis of Dengue Virus Reveals Plasticity of the NS1 Protein and Enables Generation of Infectious Tagged Reporter Viruses
... fluorescent protein systems based on GFP11/GFP(1–10) with improved complementation efficiencies (25, ...fluorescent protein, mScarlet (32), inserted within NS1 ...imaging analysis of ...detailed ... See full document
25
Genome-wide gene expression analysis of chemoresistant pulmonary carcinoid cells
... The genome-wide search for drug resistance-associated genes described here provides new evidence for possible targets to circumvent the chemoresistant phenotype of ... See full document
11
Analysis of All Protein Phosphatase Genes in Aspergillus nidulans Identifies a New Mitotic Regulator, Fcp1
... of protein phosphatase gene deletion strains. To examine the function of the protein phosphatase catalytic sub- units, 27 of the 28 identified genes were deleted in a systematic manner ... See full document
13
A Genome-Wide Gene Function Prediction Resource for Drosophila melanogaster
... to genome-wide assays of gene function available from the Drosophila RNAi Screening Center at Harvard Medical School (DRSC), where RNAi screens are undertaken to systematically interrogate ... See full document
12
Identification of low frequency TRAF3IP2 coding variants in psoriatic arthritis patients and functional characterization
... Recent genome-wide association studies (GWASs) for psoriatic arthritis and psoriasis vulgaris have been quite successful and revealed more than 25 new susceptibility loci [1-7] characterizing psoriatic ... See full document
5
Genome wide analysis of transcription factors of hd zip gene family of arabidopsis thaliana
... thaliana) genome comprises 48 genes believed to encode HD-Zips, which are clustered into four subfamilies based on their additional conserved domains, structures and physiological ...HD-Zip gene family ... See full document
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A genome wide resource for the analysis of protein localisation in Drosophila
... a protein may modify its turn-over rates and thus its expression levels, despite preserving its ...changes protein levels, we chose three different tagged proteins, expressed in different tissues, for which ... See full document
38
Genome-Wide Gene Expression Analysis Identifies the Proto-oncogene Tyrosine-Protein Kinase Src as a Crucial Virulence Determinant of Infectious Laryngotracheitis Virus in Chicken Cells
... FACS analysis of PI-stained cells found that ILTV infection in combination with the Src inhibitor resulted in levels of cell death at 2 dpi that were 4-fold higher than those in cells infected with ILTV alone FIG ... See full document
13
Genome-wide association analysis of body conformation traits in Mexican Holstein cattle using a mix of sampled and imputed SNP genotypes.
... example, gene SFXN1 codes for the protein Sideroflexin-1, which experimental evidence suggests may be involved in the transport of a required iron-utilization component into and out of the ...the ... See full document
9
A multifunctional mutagenesis system for analysis of gene function in zebrafish
... the protein trap cassette, a zebrafish B-cell CLL/lymphoma 2 (bcl2) splice acceptor sequence (at the intron 1/exon 2 junction of transcript ENSDART00000128843) was placed immediately upstream of the mCherry ... See full document
18
Genome wide Annotation, Identification, and Global Transcriptomic Analysis of Regulatory or Small RNA Gene Expression in Staphylococcus aureus
... Inconsistent genome annotation in strains USA300, MRSA252, and NCTC ...USA300 genome specifies these loci as being intergenic ...be protein-coding genes that were omitted from the USA300 ... See full document
13
A combined approach for genome wide protein function annotation/prediction
... similarity, protein 3D structure, phylogenetic profiles, protein-protein interactions (PPI), gene expres- sion profiles, protein complexes, ...a protein and the edges between ... See full document
12
Genome wide analysis of facial skeletal regionalization in zebrafish
... network analysis of pharyngeal arch genes As an independent strategy to uncover genes co-expressed in arch domains, we performed a weighted gene co-expression network analysis (WGCNA) (Zhang and ... See full document
12
Genome-wide analysis of salinity-stress induced DNA methylation alterations in cotton (Gossypium hirsutum L.) using the Me-DIP sequencing technology.
... via Gene Ontology analysis ...The gene ontology covers three domains: cellular component, the parts of a cell or its extracellular environment; molecular function, the elemental activities of ... See full document
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Genome-Wide Analysis of a Radiation-Induced Lesion Mimic Mutant in Rice
... factor protein (Yamanouchi et ...repeated protein with the activity of E3 ubiquitin ligase (Zeng et ...adaptor protein complex 1, medium subunit μ1 (AP1M1) (Qiao et ...active protein kinase ... See full document
11
In vitro assembly of infectious virions of double-stranded DNA phage phi 29 from cloned gene products and synthetic nucleic acids.
... The genome of f 29 is a linear dsDNA of 19,285 ...terminal protein gp3 is covalently linked to each 5 9 end of the genome through the formation of a phosphodi- ester bond between the -OH group of ... See full document
6
Analysis of myostatin gene structure, expression and function in zebrafish
... the zebrafish myostatin genomic gene and analyzed its expression and function in zebrafish embryos, larvae and adult skeletal ...the zebrafish myostatin mRNA was weakly expressed in ... See full document
13
Characterization of the Complete Mitochondrial Genomes of Cnaphalocrocis medinalis and Chilo suppressalis (Lepidoptera: Pyralidae)
... viously used to perform a phylogenetic analysis of C. suppressalis from 18 localities in China, and it was found that C. suppressalis was highly differentiated among the different geographical populations [55]. ... See full document
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