3′-end
Cellular proteins bind to the 3' end of Sindbis virus minus-strand RNA.
... The results presented here on the effects of binding of cellular proteins to the 3' end of the minus strand of wild-type and mutant d5 RNAs are consistent with the hypothesis that the 3'[r] ...
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3′-End Formation of Baculovirus Late RNAs
... the 3⬘ noncoding regions of many baculovirus late and very late genes tend to be very AT rich, so even the occurrence of polyadenylation signals in the expected position relative to the 3⬘ ends could just ...
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Identification of RNase L Dependent, 3′ End Modified, Viral Small RNAs in Sindbis Virus Infected Mammalian Cells
... the 3=-end nontranslated region (NTR) of Sindbis virus (SINV) genomic RNA leads to its cytoplasmic pro- cessing without affecting the viral replication (20, ...
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Nucleotide sequence of the 3' end of MCF 247 murine leukemia virus.
... We determined the nucleotide sequence of the viral long terminal repeat LTR and the 3' end of env, and we compared the sequences to corresponding sequences of the genome of Akv virus, th[r] ...
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Rotavirus protein NSP3 (NS34) is bound to the 3' end consensus sequence of viral mRNAs in infected cells.
... DISCUSSION In this report, we showed that in infected cells, the nonstructural viral protein NSP3 is bound to the 3' end of rotavirus mRNA and protects the whole 3' end consensus sequenc[r] ...
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Identification of a Novel Sequence at the 3′ End of the GB Virus B Genome
... the 3 ⴕ Y sequence. A pre- vision of the secondary structure of the GBV-B 3⬘Y novel sequence, showing a potential complex stem-loop structure, was performed (data not ...The 3⬘-terminal part of this ...
5
Generation of a uniform 3' end RNA of murine leukemia virus.
... To test the formation of such structures, increasing concentrations of total M-MuLV RNA were hybridized Both the 5' and 3' ends of the genomic 35S RNA of Moloney murine leukemia virus M-[r] ...
5
The U3 region is not necessary for 3' end formation of spleen necrosis virus RNA.
... The addition of the SV40 polyA signal sequence increased the levels of RNA transcribed from SNV vectors containing a deleted U3 or an intact U3 region.. This phenomenon is not explained [r] ...
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RNA-protein interactions at the 3' end of the hepatitis A virus RNA.
... with 3 9 end tran- scripts were ...the 3 9 -NTR or upstream ...the 3 9 -NTR, direct evidence was provided that the 3 9 -poly(A) is important for template selection and recognition ...
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Heterogeneity of the 3' end of minus-strand RNA in the poliovirus replicative form.
... 36, 1980 POLIO MINUS-STRAND RNA DISCUSSION Isolation of 3'-terminally labeled oligonucleotides produced by RNase digestion of polio minus strands yielded four products differing from one[r] ...
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RNA-protein interactions directed by the 3' end of human rhinovirus genomic RNA.
... Several explanations may be suggested to account for the appearance of the above-described cellular protein(s) in cyto- plasmic extracts from virus-infected cells. (i) A cellular protein was modified as a result of viral ...
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Transcriptional mapping of the 3' end of the bovine syncytial virus genome.
... Transactivation of human immunodeficiency virus type 1 long terminal repeatdirected gene expression by the human foamy virus bell protein requires a specific DNA sequence.. Construction [r] ...
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3'-end processing and kinetics of 5'-end joining during retroviral integration in vivo.
... of 3 9 - and 5 9 -end joining during MLV infection of unsyn- chronized 3T3 ...of 3 9 -end joining performed as for panel A except that the filter from panel A was stripped, exposed to a ...
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AdapterRemoval: easy cleaning of next generation sequencing reads
... It is well-known that the quality of a read is lower in the ends [32], with elevated error rates at both the 5’ and – in particular – 3’ end of the reads. AdapterRemoval has therefore been designed to deal ...
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In Vitro Analysis of Human Immunodeficiency Virus Type 1 Minus-Strand Strong-Stop DNA Synthesis and Genomic RNA Processing
... the 3⬘ end of the DNA primer (Fig. 2B, lanes 3 and ...lanes 3 and 16 revealed that after 5 s of incubation with RT, at least 75% of the template RNA was digested in the region where the DNA ...
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Diagnosis of porcine and bovine enteric coronavirus infections using cloned cDNA probes
... Molecular clones representing the first 2,000 bases from the 3' end of the porcine transmissible gastroenteritis coronavirus genome and the first 2,160 bases from the 3' end of the bovin[r] ...
6
A sequence element downstream of the yeast HTB1 gene contributes to mRNA 3' processing and cell cycle regulation
... the 3⬘ end of HTB1 that influ- ences at least two cellular processes, namely, mRNA 3⬘-end processing and cell cycle ...alternative 3⬘-end cleavage site just downstream of the neo ...
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A novel mitochondrial genome organization for the blue mussel, Mytilus edulis.
... The I-rRNA gene has no directly adjacent tRNA gene to define its 3' end and, therefore, its approximate 3' end was designated as the average position of the end of[r] ...
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D 3 3: Collection of end user material
... Table 4 gives an overview of the tools that were translated by the project partners. In some cases, the tool was also adapted to local growing conditions. In total 28 tools were translated, of which 16 videos, 11 ...
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Molecular cloning and sequence analysis of cDNAs encoding the transformation-sensitive actin cross-linking protein transgelin
... + end and the slower growing - end (in cells the minus end is usually attached to nucleating ...+ end that stabilise the filament, while at low tubulin levels the filaments are likely to have ...
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