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biomedical domain

Parallel Corpora for the Biomedical Domain

Parallel Corpora for the Biomedical Domain

... of biomedical information is available in the form of scientific literature and government-authored patient information ...the biomedical task in the Conference on Machine Translation (WMT’16 and WMT’17), ...

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Sieve based Coreference Resolution in the Biomedical Domain

Sieve based Coreference Resolution in the Biomedical Domain

... the biomedical domain, makes these systems effec- tively intractable for human experts, and so studies are typ- ically reductionist, focusing on a single pathway at a ...

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Supporting shared hypothesis testing in the biomedical domain

Supporting shared hypothesis testing in the biomedical domain

... algorithms have been used by Stuckenschmidt et al. [33] to identify islands of ontology, a notion comparable to a module of ontology (as used by the graph-based modu- lar extraction community), with the applications to ...

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A Maximum-Entropy approach for accurate document annotation in the biomedical domain

A Maximum-Entropy approach for accurate document annotation in the biomedical domain

... in biomedical papers to respective patient medication status ...annotate biomedical documents with gene functions using terms from ...ing biomedical documents for text retrieval, compared to the GO, ...

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Ongoing Developments in Automatically Adapting Lexical Resources to the Biomedical Domain

Ongoing Developments in Automatically Adapting Lexical Resources to the Biomedical Domain

... This paper describes a range of experiments using empirical methods to adapt the WordNet noun ontology for specific use in the biomed- ical domain. Our basic technique is to extract relationships between terms ...

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Insights into Analogy Completion from the Biomedical Domain

Insights into Analogy Completion from the Biomedical Domain

... the biomedical domain, as we see non-morphological related pairs such as predisposed:disease susceptibility and venous lu- men:endovenous, in addition to more normal pairs like sweating:sweaty and ...

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Co-occurrence graphs for word sense disambiguation in the biomedical domain

Co-occurrence graphs for word sense disambiguation in the biomedical domain

... The co-occurrence graph used by the approach presented here is based on the hypothesis that documents are consistent, i.e., there is a strong tendency for the concepts found in a document to be related. Since this may ...

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Ontology alignment in the biomedical domain using entity definitions and context

Ontology alignment in the biomedical domain using entity definitions and context

... by the user or developer of the matching system (Djeddi and Khadir, 2013; Peng, 2010; Huang et al., 2008; Hariri et al., 2006). These systems do not use neural networks to generate and learn the features most appropriate ...

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Named Entity Recognition in Biomedical Domain: A Survey

Named Entity Recognition in Biomedical Domain: A Survey

... In the world of exponentially growing web data, information is rapidly increasing. When user requests for any information, the response to the request is in an unstructured form. The conversion of unstructured ...

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A System for Building FrameNet like Corpus for the Biomedical Domain

A System for Building FrameNet like Corpus for the Biomedical Domain

... The projects, such as PASBio (Wattarujeekrit et al., 2004), BioProp (Tsai et al., 2006) and BioFrameNet (Dolbey et al., 2006), have made ef- forts on building resources for training SRL sys- tems in the biomedical ...

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Parser Adaptation to the Biomedical Domain without Re Training

Parser Adaptation to the Biomedical Domain without Re Training

... Although the Penn Treebank has been a vital tool in the development and evaluation of pars- ing technology, providing a standard dataset for comparison of parsers, practical application of these techniques usually ...

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Generating and using probabilistic morphological resources for the biomedical domain

Generating and using probabilistic morphological resources for the biomedical domain

... Different studies rely on morphology to perform some terminological analysis. It is especially the case in the biomedical domain. Indeed, on the one hand, terminolo- gies are a keystone for many ...

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Searching Ontologies Based on Content: Experiments in the Biomedical Domain

Searching Ontologies Based on Content: Experiments in the Biomedical Domain

... As more ontologies become publicly available, finding the “right” ontologies becomes much harder. In this paper, we address the problem of ontology search: finding a collection of ontologies from an ontology repos- itory ...

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This before That: Causal Precedence in the Biomedical Domain

This before That: Causal Precedence in the Biomedical Domain

... The Big Mechanism program (Cohen, 2015) aims to construct exactly such large-scale mecha- nistic information by reading and assembling pro- tein signaling pathways that are relevant for can- cer, and exploit them to ...

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Adapting the TTL Romanian POS Tagger to the Biomedical Domain

Adapting the TTL Romanian POS Tagger to the Biomedical Domain

... aggregation domain adaptation method, high-quality training data in both the source and the target domains is vital for a good performance of the POS ...in biomedical domain re- mains a barrier for ...

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Language Resources for French in the Biomedical Domain

Language Resources for French in the Biomedical Domain

... the biomedical literature is available in English, many other important documents in the biomed- ical domain are written in other languages, such as Elec- tronic Health Records (EHR), medical school lecture ...

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Question Answering in the Biomedical Domain

Question Answering in the Biomedical Domain

... the domain to evolve from shallow keyword matching to contextual and semantic retrieval sys- tems (Kadam et ...open- domain (Soares and Parreiras, 2018) and the chal- lenges harbouring the biomedical ...

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Unsupervised and Semi Supervised Morphological Analysis for Information Retrieval in the Biomedical Domain

Unsupervised and Semi Supervised Morphological Analysis for Information Retrieval in the Biomedical Domain

... the biomedical domain where terminologies are central to many applications and where terms are constructed by operations like neo-classical composition ...the biomedical domain: the morphology ...

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GENIA-GR: a Grammatical Relation Corpus for Parser Evaluation in the Biomedical Domain

GENIA-GR: a Grammatical Relation Corpus for Parser Evaluation in the Biomedical Domain

... fields, biomedical text mining has become an important research ...to biomedical text, there is now a growing interest in applying more advanced natural language processing techniques, such as full ...

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Entity recognition in the biomedical domain using a hybrid approach

Entity recognition in the biomedical domain using a hybrid approach

... for biomedical entity recognition based on dictionary lookup and flexible ...of biomedical text mining technologies, often obtaining top-ranked results ...of biomedical entities in given doc- ...a ...

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