Database of Annotation Visualization and Integrated Discovery
A maple syrup extract alters lipid metabolism in obese type 2 diabetic model mice
... the Database for Annotation, Visualization and Integrated Discovery ...the annotation file Mouse 430 2 Anno- tations Release 35 ...
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Potential molecular characteristics in situ in response to repetitive UVB irradiation
... DAVID: Database for annotation, visualization and integrated discovery; DCT: Dopachrome tautomerase; DEGs: Differentially expressed genes; DEGs: Differentially expressed genes; DNAJB4: ...
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Expression of genes associated with BMP signaling pathway in porcine oocytes before and after IVM – a microarray approach
... RT-qPCR. Database for Annotation, Visualization, and Integrated Discovery (DAVID) software was used for the extraction of the genes belonging to a BMP-signaling pathway ontology ...
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Intestinal transcriptional profiling reveals fava bean-induced immune response in DBA/1 mice
... DAVID: database for annotation, visualization and integrated discovery; DEGs: differentially expressed genes; GO: gene ontology; IBD: inflammatory bowel disease; TLR2: toll-like ...
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Salivary miRNA profiles identify children with autism spectrum disorder, correlate with adaptive behavior, and implicate ASD candidate genes involved in neurodevelopment
... 2014 annotation). This database version identifies 2588 human miRNAs and 947,941 target ...Functional Annotation Cluster- ing tool from the Database for Annotation, ...
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Robust analysis of novel mRNA–lncRNA cross talk based on ceRNA hypothesis uncovers carcinogenic mechanism and promotes diagnostic accuracy in esophageal cancer
... DAVID, database for annotation, visualization, and integrated discovery; DElncRNAs, differentially expressed long noncoding RNAs; DEmiRNAs, differentially expressed microRNAs; DEmRNAs, ...
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High-content screen in human pluripotent cells identifies miRNA-regulated pathways controlling pluripotency and differentiation
... AGO: Argonaute; atRA: All-trans retinoic acid; DAVID: Database for Annotation, Visualization and Integrated Discovery; DL1: Delta-Like 1; EBs: Embryoid bodies; ECCs: Embryonal carcinoma [r] ...
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Transcriptomic analyses reveal the underlying pro-malignant functions of PTHR1 for osteosarcoma via activation of Wnt and angiogenesis pathways
... DAVID: Database for Annotation, Visualization and Integrated Discovery; DEGs: Differentially expressed genes; Dkk1: Dickkopf-related protein 1; FGF- 2: Fibroblast growth factor 2; GO: ...
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Human iPSC-derived MSCs (iMSCs) from aged individuals acquire a rejuvenation signature
... aMSC: Adult MSC; CD: Cluster of differentiation; DAVID: Database for Annotation, Visualization and Integrated Discovery; EB: Embryoid body; ESCs: Embryonic stem cells; FACS: Fluorescence[r] ...
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Identification of target genes in cardiomyopathy with fibrosis and cardiac remodeling
... R. Database for Annotation, Visualization, and Integrated Discovery (DAVID Tool), which is an analysis of enriched biological ...
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miR-363-5p as potential prognostic marker for hepatocellular carcinoma indicated by weighted co-expression network analysis of miRNAs and mRNA
... the Database for Annotation, Visualization and Integrated Discovery; FDR: False discovery rate; GO: Gene Ontology; GS: Gene significance; HBV: Chronic hepatitis B virus; HCC: ...
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TGFβ-induced switch from adipogenic to osteogenic differentiation of human mesenchymal stem cells: identification of drug targets for prevention of fat cell differentiation
... by annotation of the gene sets and integration of parallel data ...functional annotation and enrichment analysis using the online resource Database for Annotation, Visualization and ...
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To Study the Principles of Knowledge Discovery in Database
... the database, the wide distribution of data, and the computational complexity of some data mining methods motivate the development of parallel and distributed data mining ...knowledge discovery may lead to ...
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Maize microarray annotation database
... The questions are, however, how many genes are repre- sented by these reporters and how much confidence is there in their annotations? To address these questions, we extracted tables of differentially expressed reporters ...
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The Projector: An Interactive Annotation Projection Visualization Tool
... while annotation projection has been successfully employed to transfer various types of annota- tion (Yarowsky et ...specific annotation can be transferred to a spe- cific ...incorrect annotation to ...
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Genome sequence of the marine bacterium Corynebacterium maris type strain Coryn-1T (= DSM 45190T)
... 7. Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Far- ris RJ, Kulam-Syed-Mohideen AS, McGarrell DM, Marsh T, Garrity GM, et al. The Ribosomal Data- base Project: improved alignments and new tools for rRNA analysis. ...
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Visualization for Verification Driven Learning in Database Studies
... A database is a collection of organized data which is accessed depending on the requirement of the ...A database always serves as the backend of applications to store the information that has been collected ...
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Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11T (= DSM 44721T)
... 11. Cole JR, Chai B, Farris RJ, Wang Q, Kulam-Syed- Mohideen AS, McGarrell DM, Bandela AM, Car- denas E, Garrity GM, Tiedje JM. The ribosomal da- tabase project (RDP-II): introducing myRDP space and quality controlled ...
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Expression profiling of white sponge nevus by RNA sequencing revealed pathological pathways
... including early diagnosis of the transformation of pre- malignant lesions, identification of malignancy in tissue biopsies, drug discovery, identification of biomarkers, and subclassification of histologically ...
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Data Mining and Knowledge Discovery in Database
... 10) User interaction and prior knowledge: Many current KDD methods and tools are not truly interactive and cannot easily incorporate prior knowledge about a problem except in simple ways. The use of domain knowledge is ...
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