environmental DNA
Beyond Biodiversity: Can Environmental DNA (eDNA) Cut it as a Population Genetics Tool?
... Environmental DNA is already being used to improve biodiversity estimates ...[19]. Environmental DNA methods are not without challenges, but because eDNA offers sampling advantages such as ...
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How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys
... published environmental 'radiolarian' phylotypes DH145-KW16 [28] and CS_E043 ...eukaryotic environmental DNA surveys The correct identification of higher-level phyla is only one of the problems ...
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Environmental DNA detects critically endangered largetooth sawfish in the wild
... Environmental DNA (eDNA) is a relatively new and emerging technique that detects trace amounts of DNA from an aquatic species within water sam- ples taken from putative habitats (Ficetola et ...
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Environmental DNA illuminates the dark diversity of sharks
... effort, environmental DNA (eDNA) detects 44% more shark species than traditional underwater visual censuses and baited videos across the New Caledonian archipelago (south-western ...
9
Parasite detection in the ornamental fish trade using environmental DNA
... Effective border control relies on stringent biosecurity protocols to detect and prevent introductions of exotic pests and diseases. Detection of pathogens and parasites in the live ornamental fish trade using ...
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Environmental DNA reveals tropical shark diversity in contrasting levels of anthropogenic impact
... Environmental DNA metabarcoding has a number of advantages compared to classical approaches for mon- itoring elasmobranchs. It is a minimally invasive and resource-effective technique. The eDNA sampling and ...
12
Application of environmental DNA to detect an endangered marine skate species in the wild
... Environmental DNA has recently been used to investigate more specific population genetic characteristics of rare elasmobranchs in the wild, based on comparing mitochondrial eDNA haplotype frequencies ...
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Accessing Genes from Environmental DNA Libraries
... of environmental DNA libraries provided that it can be replicated and stably maintained in the ...of environmental DNA ...metagenomic DNA. Future work may include cloning ...
191
Detection of Galba truncatula, Fasciola hepatica and Calicophoron daubneyi environmental DNA within water sources on pasture land, a future tool for fluke control?
... water-based environmental DNA (eDNA) assays may be a valuable tool for identifying the presence of both snail and digen- ean species, and subsequently to estimate the infection risk for livestock grazing a ...
9
Applications and limitations of measuring environmental DNA as indicators of the presence of aquatic animals
... eDNA analysis is fast becoming an important tool in the study of aquatic species; alternative ... standardization of this technique’ due to the very different nat[r] ...
10
Environmental DNA (eDNA) and environmental RNA (eRNA) markers for detection of grass carp (Ctenopharyngodon idella)
... Synthesis of cDNA was completed using the High Capacity cDNA Reverse Transcription Kit (Applied Biosystems) to convert RNA to cDNA. Due to difficulty getting eRNA to synthesize, sample RNA was not diluted nor ...
92
Molecular ecology of facultative methanotrophs
... pmoA microarray experiments were performed as described in Stralis-Pavese et al., (2004). pmoA genes were amplified from environmental DNA in triplicate using primer set A189f and T7mb650. Amplified PCR ...
338
Articles
... Environmental DNA from Ryukyu ayu was detected in sites where no fish were observed (Table 1, Fig. 3), although these sites were within the known distribution range of Ryukyu ayu (G. Kume, unpublished ...
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Ancient plant DNA in lake sediments
... A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa.. Pedersen MW, Overballe-Petersen S, E[r] ...
48
DNA metabarcoding unveils multi scale trophic variation in a widespread coastal opportunist
... of environmental DNA to characterise the biological community present at each ...recent DNA deposits and the habitat where the shrimp live and feed (Pinn & Ansell 1993; Turner et ...
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Methods for the extraction, storage, amplification and sequencing of DNA from environmental samples
... of environmental DNA from a broad range of taxa, including arthropods and annelids (Table S16 in Supplementary ...earthworm DNA from soil samples. To identify earthworm species from DNA ...
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Identification and characterization of a novel DNA marker associated with epidemic Burkholderia cepacia strains recovered from patients with cystic fibrosis
... polymorphic DNA (RAPD) typing scheme, we identified an apparently conserved ...the DNA fingerprint of epidemic B. cepacia strains. Conservation of the DNA marker among epidemic strains was ...
9
Impact of Early Environment on Children's Mental Health: Lessons From DNA Methylation Studies With Monozygotic Twins
... in DNA methylation in affected co-twins of 34 adult twins (17 MZ pairs) discordant for ...differentially DNA methylated probe in blood in the WDR26 gene, a gene that has also been associated with major ...
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Environmental epigenomics : altered DNA methylation patterns in humans exposed to inorganic arsenic
... the DNA methylation profiles of these individuals, including reduced representation bisulfite sequencing (RRBS) and methylated CpG island recovery assay ...
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DNA damage and estrogenic activity induced by the environmental pollutant 2-nitrotoluene and its metabolite
... labeled DNA fragments obtained from the human p53 tumor suppressor ...oxidative DNA damage, was measured using an electrochemical detector coupled to an HPLC system ...
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