Expressed Sequence Tag
Analysis of Expressed Sequence Tag Loci on Wheat Chromosome Group 4
... A total of 1918 loci, detected by the hybridization of 938 expressed sequence tag unigenes (ESTs) from 26 Triticeae cDNA libraries, were mapped to wheat (Triticum aestivum L.) homoeologous group 4 ...
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A Comprehensive Expressed Sequence Tag Linkage Map for Tiger Salamander and Mexican Axolotl: Enabling Gene Mapping and Comparative Genomics in Ambystoma
... Expressed sequence tag (EST) markers were developed for Ambystoma tigrinum tigrinum (Eastern tiger salamander) and for A. mexicanum (Mexican axolotl) to generate the first comprehensive linkage map ...
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A Chromosome Bin Map of 2148 Expressed Sequence Tag Loci of Wheat Homoeologous Group 7
... Bio/Technology 12: 276–278. Sorrells, M. E., M. La Rota, C. E. Bermudez-Kandianis, R. A. Lazo, G. R., S. Chao, D. D. Hummel, H. Edwards, C. C. Crossman Greene, R. Kantety et al., 2003 Comparative DNA sequence et ...
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Genetic diversity analysis in Malaysian giant prawns using expressed sequence tag microsatellite markers for stock improvement program.
... Genetic diversity analysis in Malaysian giant prawns using expressed sequence tag microsatellite markers for stock improvement program.. K.H.[r] ...
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Comparison of Quantitative Trait Loci for Adaptive Traits Between Oak and Chestnut Based on an Expressed Sequence Tag Consensus Map
... To compare QTL positions between Quercus and Castanea, linkage groups were aligned to identify ortho- logous genomic regions. In previous work, seven linkage groups were aligned between these two species using ...
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A Chromosome Bin Map of 16,000 Expressed Sequence Tag Loci and Distribution of Genes Among the Three Genomes of Polyploid Wheat
... that expressed sequence tag (EST) netic stocks selected for EST mapping were cytologically and/ or molecularly verified by C-banding and Southern hybridiza- analysis has opened exciting prospects for ...
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Changes on microsatellites of expressed sequence tag of sugarcane (Saccharum spp) during vegetative propagation.
... The conclusion and recommendation from our study is that the comparison among different sugarcane varieties in order to find the contrasting genotypes should be made using varieties in the same cutting stage since that ...
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Enabling Large Scale Scientific Computations for Expressed Sequence Tag Sequencing over Grid and Cloud Computing Clusters
... (Expressed Sequence Tag) corresponds to messenger RNAs (mRNAs) transcribed from the genes residing on ...EST sequence represents a fragment of mRNA, and the EST assembly aims to re-construct ...
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Expressed Sequence Tag Analysis of the Human Pathogen Paracoccidioides brasiliensis Yeast Phase: Identification of Putative Homologues of Candida albicans Virulence and Pathogenicity Genes
... brasiliensis expressed sequence tag (EST) sequences (The ...database sequence matches (putative homologues) were divided into highly significant (P ⱕ 10 ⫺19 ), moderately significant (1e-10 to ...
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Construction and Evaluation of cDNA Libraries for Large-Scale Expressed Sequence Tag Sequencing in Wheat (Triticum aestivum L.)
... used to recover genes related to specific traits of develop- ing transcript sequences from cDNA library sequencing. mental stages that were not readily accessible using hexaploid Single-end sequences of cDNAs are known ...
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Development of an Expressed Sequence Tag (EST) Resource for Wheat (Triticum aestivum L.)
... wheat.pw.usda.gov) from which they were further distributed to additional public databases such as NCBI and Gramene (Figure 1). As sequences were processed, background infor- continued with the identification of ...
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Enabling Large Scale Scientific Computations for Expressed Sequence Tag Sequencing over Grid and Cloud Computing Clusters
... Job Execution Manager: submit Job Distributor jobs through CondorG using Grid HPC/Condor pool MyProxy birdbath WS interface Resource Connector Server Condor resource connector by manages[r] ...
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Evaluating the Significance of Global and Local Features in Expressed Sequence Tag: A Clustering Quality Perspective
... all expressed data are partitioned into index classes such that expressed data are put into the same index class if and only they represent the same gene ...
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Evolutionary Expressed Sequence Tag Analysis of Drosophila Female Reproductive Tracts Identifies Genes Subjected to Positive Selection
... gaster : YP1, YP2, and YP3 (Barnett et al. 1980). These genes Our first goal in carrying out this EST screen was to were screened out of the library since yolk protein RNAs are identify a suite of genes whose products ...
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Molecular and Bioinformatic Characterization of the Rice ROOT UV-B SENSITIVE Gene Family
... EST: Expressed sequence tag; GFP: Green fluorescent protein; GPI- anchor: Glycosylphosphatidylinositol anchor; MPSS: Massively parallel signature sequencing; NCBI: The National Center for ...
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The Use of Sequence Based SSR Mining for the Development of a Vast Collection of Microsatellites in Aquilegia formosa
... Numerous microsatellite markers were developed for Aquilegia formosa from sequences depo- sited within the Expressed Sequence Tag (EST), Genomic Survey Sequence (GSS), and Nucleotide databases ...
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Effective Procedure for Development of EST SSR Markers Using cDNA Library
... velop expressed sequence tag-simple sequence repeat (EST-SSR) markers of the brown plant hopper resistance gene for the “Cheongcheong” and the sensitive rice culti- var, ...
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Candidate chemosensory Genes in Female Antennae of the Noctuid Moth Spodoptera littoralis
... The noctuid moth Spodoptera littoralis is one of the major Lepidoptera models used in olfaction re- search. This polyphagous noctuid species is an im- portant cotton pest, and extensive research has led to a ...
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Foreign genes and novel hydrophilic protein genes participate in the desiccation response of the bdelloid rotifer Adineta ricciae
... an expressed sequence tag (EST) library enriched for genes that are active during desiccation stress and characterised a subset of clones of both recognised and novel ...
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Genetic variation, population structure and linkage disequilibrium in Switchgrass with ISSR, SCoT and EST-SSR markers
... [7]. Expressed sequence tag-simple sequence repeats marker (EST-SSR) detects variation based on the expressed portion of the genome from EST databases, thus explaining the low cost of ...
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